Factsheet for Os03t0625300-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G242800.1	Wheat	plastid	54.48	61.37
TraesCS4B01G072300.1	Wheat	plastid	54.86	60.89
TraesCS4D01G071100.1	Wheat	plastid	54.86	60.63
TraesCS4D01G071000.1	Wheat	plastid	55.05	59.71
TraesCS4A01G242900.1	Wheat	plastid	55.05	59.59
TraesCS4B01G072200.1	Wheat	plastid	54.48	59.58
TraesCS4B01G072100.1	Wheat	plastid	54.1	58.56
HORVU4Hr1G012000.11	Barley	plastid	53.33	58.33
Zm00001d033304_P001	Maize	mitochondrion, plastid	50.48	55.09
OQU91330	Sorghum	mitochondrion	51.24	54.23
GSMUA_Achr7P08190_001	Banana	cytosol	28.19	44.85
GSMUA_Achr9P09670_001	Banana	plastid	31.43	44.84
GSMUA_Achr9P26470_001	Banana	nucleus	35.05	44.44
Os12t0594000-00	Rice	cytosol, peroxisome, plastid	48.76	42.74
GSMUA_Achr6P34640_001	Banana	plastid	30.29	40.46
Os03t0738700-01	Rice	plasma membrane	36.38	39.06
GSMUA_Achr2P17180_001	Banana	golgi	32.76	36.67
Os06t0238700-00	Rice	cytosol, nucleus, peroxisome, plastid	25.9	34.09
Os02t0740900-01	Rice	plastid	24.38	31.45
Os01t0946100-02	Rice	cytosol, plastid	24.95	30.39
Os01t0232200-00	Rice	cytosol	26.29	26.29
Os04t0481600-00	Rice	cytosol	23.81	24.18

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	UniProt:A0A0P0W0A9	ProteinID:BAS85336.1	InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	EnsemblPlantsGene:Os03g0625300
EnsemblPlants:Os03t0625300-00	PFAM:PF00400	PRINTS:PR00320	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR22844
PANTHER:PTHR22844:SF323	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI000393B70C	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat
InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg	:	:	:

Description

OsWD40-77Similar to nucleotide binding protein. (Os03t0625300-00)

Coordinates

chr3:+:23781012..23782726

Molecular Weight (calculated)

57140.2 Da

IEP (calculated)

11.381

GRAVY (calculated)

-0.540

Length

525 amino acids

Sequence
(BLAST)

001: MSRRRASHGI LPRTLRLYWC SYIYRHVSSS PASNSNLASD ATCLLLPFGL AFLPCDSGHS SEHHPRLEKL STRIDRSPWA AATGSSSTCS APSRRRRRPR
101: RRRRRSRPSL SRRPPPPTTT GVARRRGRRT TAPVGTGPRP RRRRGAARRR RPSRRGRRTC RGLAAAGWGR APAPPGSGLV KAIVVADDGR IFTGHQDGKV
201: RVWRADAGDP AVHRRVGSLP RLADYVRSSV NPSSYVETPR RRRGRRREVW LRHSDAVSCL SLDEGAGLLY SASWDGSFKV WRVSDSRCLE SVCAHDDAIN
301: TVAAAGFDGV VFTGSADGTV KVWRREEEPA ASGGEAKTRH VLETVLREDE SAVTAIAVSA EGRVVYVGSS DGDVTYWHWI DGEARYGGAL RAHGTAVMCL
401: AVAGNVVVSG SADRTLCAWR RGGGEHSRLA VLAGHTGPVK CVAVDEEETS SCSSDGERRF VVYSGSLDGS VKVWRISDIE PTNPPPRLPS PHVWKREDQP
501: AAATAAAARA WSPYQTSEMN SVAAA

Best Arabidopsis Sequence Match ( AT3G50390.1 )
(BLAST)

001: MSSMHKKGTS RDVNSQAFTK LTKVETIPDP DIYDITYVDI SPSEGSSSPL SKSPWSVQVD PSAVDSPYHS VKVTTDTTKE KSTNHSPNIL LGSLVREEGH
101: IYSLATSGDL LYTGSDSKNI RVWKNHVEFS SFKSNSGLVK AIVLAGDKIF TGHQDGKIRV WKAASKESNV HRRVGTMPNL LDYIRNSIVP SSYFNFTRRN
201: RSSAALGFRH LDAISCLALS EDKRLLYSGS WDKTFKVWRV SDLRCVESVN AHEDAVNAVV SGFDGLVFTG SADGTVKVWR REDQAKDTKH FFSETLLKQD
301: CAVTAIAVDQ SATLVYCGSS DGTVNFWERE NNMKNGGVLK GHKLAVLCLV AAGNLMFSGS ADLGIRVWRR PEGGGEHVCL SVLTGHAGPV KCLAVERDQE
401: SVSGERRWIV YSGSLDRSVK MWRVSESSPP MVNQEFKLPD QFGGGGGGGP AELTVAPSFS AQGRISPQK

Arabidopsis Description

At3g50390 [Source:UniProtKB/TrEMBL;Acc:A2RVN9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.