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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • mitochondrion 3
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4A01G242900.1 Wheat plastid 95.87 95.67
TraesCS4B01G072100.1 Wheat plastid 94.21 94.02
TraesCS4D01G071100.1 Wheat plastid 90.08 91.79
HORVU4Hr1G012000.11 Barley plastid 88.02 88.75
Zm00001d033304_P001 Maize mitochondrion, plastid 66.32 66.74
OQU91330 Sorghum mitochondrion 66.74 65.12
TraesCS5D01G074900.1 Wheat cytosol 60.54 65.11
Os03t0625300-00 Rice mitochondrion 59.71 55.05
GSMUA_Achr9P26470_001 Banana nucleus 46.07 53.86
GSMUA_Achr7P08190_001 Banana cytosol 35.54 52.12
GSMUA_Achr9P09670_001 Banana plastid 38.84 51.09
TraesCS5D01G389000.1 Wheat cytosol 45.25 46.11
GSMUA_Achr6P34640_001 Banana plastid 36.98 45.55
GSMUA_Achr2P17180_001 Banana golgi 42.15 43.5
TraesCS3D01G480400.1 Wheat plastid 30.79 34.81
TraesCS3D01G163800.1 Wheat cytosol 30.17 28.91
TraesCS2D01G338900.1 Wheat plastid 26.03 28.51
TraesCS7D01G196700.1 Wheat cytosol 28.1 27.36
Protein Annotations
Gene3D:2.130.10.10MapMan:35.1InterPro:G-protein_beta_WD-40_repGO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR001680InterPro:IPR015943InterPro:IPR017986PFAM:PF00400PRINTS:PR00320PFscan:PS50082
PFscan:PS50294PANTHER:PTHR22844PANTHER:PTHR22844:SF323SMART:SM00320SUPFAM:SSF50978EnsemblPlantsGene:TraesCS4D01G071000
EnsemblPlants:TraesCS4D01G071000.1InterPro:WD40/YVTN_repeat-like_dom_sfInterPro:WD40_repeatInterPro:WD40_repeat_domInterPro:WD40_repeat_dom_sfTIGR:cd00200
SEG:seg:::::
Description
No Description!
Coordinates
chr4D:+:46176971..46178425
Molecular Weight (calculated)
51241.0 Da
IEP (calculated)
8.081
GRAVY (calculated)
-0.224
Length
484 amino acids
Sequence
(BLAST)
001: MGNHQKLLNF LRPDPAAVAA CSPRSFSSSS ASVSDDDGYS CSSYPTTDGD ASPSRYGGSS TPPTPKSPWA HLPGLGAGGA VAEPGATGLI ASLVKEDGHV
101: YSLAATGDVL YTGTDSRNVR VWRDQRELAG FRTASGLVKA IVVADDGRIF TGHQDGKVRV WRADADNPAV HRQVGSLPKL KDYLKSAVNP TSYVETQRRG
201: RQRAVWLRHS DAVSSLSLNE GAGLLYTASW DRTFKVWRLS DSKCLESVSA HDDAVNTVAA AGFESVVFTG SADGTVKVWR REMAPKGDAT RHVLETVLRK
301: GEGAVTAIAV SPEDRVVYVG SSDGLVTFWH WVDGEARYGG VLKGHRMAVM CLAVAGNVVV SGSADRTLCV WRRDGAEHVG LALLAGHTGP VKCVAMDEEA
401: AAAGSGGDRR FVVYSGSLDG SVKVWRLADA EAEPATTVRV TERTAAAPAQ PSQVWRGQPA PAAYAEAWAP CQTPELKRVR VAAA
Best Arabidopsis Sequence Match ( AT1G49450.1 )
(BLAST)
001: MAIEENRSHN DYLRRMTFAA FLKSGSLAAE EETYHSDGDH HNQSTFSSNS DSQRPSNASS ASSDSSSPIY PLSPWNQTYY PSNDNTTSFS SVTQSPWNQT
101: YSPYHKSPWI YQTRNSDFED DPDNGLIGTV VRQEGHVYSL AASGDLLFTG SDSKNIRVWK DLKDFSGFKS TSGFVKAIVV TRDNRVFTGH QDGKIRVWRG
201: SKKNPEKYSR VGSLPTLKEF LTKSVNPRNY VEVRRRKNVL KIRHFDAVSC LSLNEDLGLL YSGSWDKTLK VWRLSDSKCL ESIEAHDDAV NTVVSGFDDL
301: VFTGSADGTL KVWKREVQGK EMKHVLVQVL MKQENAVTAL AVNLTDAVVY CGSSDGTVNF WERQKYLTHK GTIHGHRMAV LCLATAGSLL LSGGADKNIC
401: VWKRNGDGSH TCLSVLMDHE GPVKCLAAVE EAEEDHNDGD DGGEKGDQRW IVYSGSLDNS VKVWRVTDYA S
Arabidopsis Description
F13F21.11 protein [Source:UniProtKB/TrEMBL;Acc:Q9XIB2]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.