Factsheet for GSMUA_Achr7P08190_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P17180_001	Banana	golgi	65.45	46.06
GSMUA_Achr9P09670_001	Banana	plastid	48.48	43.48
GSMUA_Achr9P26470_001	Banana	nucleus	53.33	42.51
TraesCS5D01G074900.1	Wheat	cytosol	56.36	41.33
GSMUA_Achr3P30740_001	Banana	cytosol	43.64	41.14
TraesCS5B01G068600.1	Wheat	cytosol	56.06	41.11
TraesCS5A01G063900.1	Wheat	cytosol	55.76	40.8
GSMUA_Achr6P34640_001	Banana	plastid	46.67	39.19
Zm00001d041381_P001	Maize	cytosol, mitochondrion	53.33	37.29
GSMUA_Achr4P10690_001	Banana	cytosol, endoplasmic reticulum, plastid	42.12	37.27
TraesCS4A01G242800.1	Wheat	plastid	52.12	36.91
TraesCS4A01G242900.1	Wheat	plastid	53.64	36.49
TraesCS4B01G072300.1	Wheat	plastid	51.82	36.15
TraesCS4D01G071100.1	Wheat	plastid	51.52	35.79
TraesCS4B01G072200.1	Wheat	plastid	51.82	35.62
Zm00001d033304_P001	Maize	mitochondrion, plastid	51.82	35.55
TraesCS4D01G071000.1	Wheat	plastid	52.12	35.54
GSMUA_Achr6P20880_001	Banana	cytosol	42.12	35.46
OQU91330	Sorghum	mitochondrion	53.03	35.28
HORVU4Hr1G012000.11	Barley	plastid	50.61	34.79
OQU79483	Sorghum	cytosol, mitochondrion, nucleus	53.33	34.71
GSMUA_AchrUn_...	Banana	nucleus	41.82	34.67
TraesCS4B01G072100.1	Wheat	plastid	50.91	34.64
Os12t0594000-00	Rice	cytosol, peroxisome, plastid	54.55	30.05
HORVU5Hr1G017260.1	Barley	plastid	46.06	28.68
GSMUA_Achr4P07470_001	Banana	endoplasmic reticulum, plasma membrane	42.73	28.31
Os03t0625300-00	Rice	mitochondrion	44.85	28.19
GSMUA_Achr11P...	Banana	cytosol	30.61	27.15
GSMUA_Achr6P36100_001	Banana	cytosol	31.52	26.46
GSMUA_Achr9P07610_001	Banana	nucleus	32.42	26.29
GSMUA_Achr7P19910_001	Banana	cytosol	32.73	24.55
GSMUA_Achr3P17140_001	Banana	cytosol	32.73	24.32
GSMUA_Achr4P03080_001	Banana	mitochondrion, nucleus, peroxisome, plasma membrane	43.94	22.66
GSMUA_Achr10P...	Banana	nucleus	29.7	20.85
GSMUA_Achr8P28630_001	Banana	cytosol	29.7	19.07

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
EnsemblPlantsGene:GSMUA_Achr7G08190_001	EnsemblPlants:GSMUA_Achr7P08190_001	EnsemblPlants:GSMUA_Achr7T08190_001	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986
UniProt:M0TFQ9	PFAM:PF00400	PRINTS:PR00320	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR22844
PANTHER:PTHR22844:SF270	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI000295B67A	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat
InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg	:	:	:

Description

Putative Uncharacterized WD repeat-containing protein alr3466 [Source:GMGC_GENE;Acc:GSMUA_Achr7G08190_001]

Coordinates

chr7:-:6126314..6127967

Molecular Weight (calculated)

35538.0 Da

IEP (calculated)

9.365

GRAVY (calculated)

-0.129

Length

330 amino acids

Sequence
(BLAST)

001: MGARKEATCI PSFSTKLLHL LHSDAIVPSE EELRWVGSDA AACYVTRPWT SSYNISLWNP AAASPLGHVY SLAAAGGLLY TGSETRNIRV WKGRQELSSF
101: RSSSGFVKAI VVAGDRIFTS HQDGKIRVWR SSSKDPSVHK RVMTLPTLGD FLRSSMNPSR YDAGVLYSGS WDKTVKVWRI SDCKCLESFN AHDDAVNAVA
201: TGFDGLVFTG SADGTVKAWR REVAAGVKDG IGGATRHVSA QTLLQQEGAV TALAVVAAVG TVGSADRTIR VWRREEGGGA HVVVATLVGH AAPIKCVAVE
301: ADAEEDRGDR RRYVVYSGSL DNSVKIWRVG

Best Arabidopsis Sequence Match ( AT3G50390.1 )
(BLAST)

001: MSSMHKKGTS RDVNSQAFTK LTKVETIPDP DIYDITYVDI SPSEGSSSPL SKSPWSVQVD PSAVDSPYHS VKVTTDTTKE KSTNHSPNIL LGSLVREEGH
101: IYSLATSGDL LYTGSDSKNI RVWKNHVEFS SFKSNSGLVK AIVLAGDKIF TGHQDGKIRV WKAASKESNV HRRVGTMPNL LDYIRNSIVP SSYFNFTRRN
201: RSSAALGFRH LDAISCLALS EDKRLLYSGS WDKTFKVWRV SDLRCVESVN AHEDAVNAVV SGFDGLVFTG SADGTVKVWR REDQAKDTKH FFSETLLKQD
301: CAVTAIAVDQ SATLVYCGSS DGTVNFWERE NNMKNGGVLK GHKLAVLCLV AAGNLMFSGS ADLGIRVWRR PEGGGEHVCL SVLTGHAGPV KCLAVERDQE
401: SVSGERRWIV YSGSLDRSVK MWRVSESSPP MVNQEFKLPD QFGGGGGGGP AELTVAPSFS AQGRISPQK

Arabidopsis Description

At3g50390 [Source:UniProtKB/TrEMBL;Acc:A2RVN9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.