Factsheet for TraesCS3A01G485100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G480400.1	Wheat	plastid	94.47	91.82
TraesCS3B01G532800.1	Wheat	cytosol, plastid	93.03	89.58
HORVU3Hr1G106030.1	Barley	plastid	92.55	88.3
Os01t0946100-02	Rice	cytosol, plastid	70.91	68.45
KXG34097	Sorghum	plastid	71.88	68.26
Zm00001d042132_P001	Maize	plastid	62.98	65.17
GSMUA_Achr11P...	Banana	cytosol	48.8	54.57
KRH39863	Soybean	cytosol, plastid	52.4	52.4
VIT_13s0019g01680.t01	Wine grape	plastid	50.0	52.39
AT3G51930.1	Thale cress	cytosol, plastid	52.16	52.29
PGSC0003DMT400017340	Potato	plastid	51.2	51.82
CDY23176	Canola	cytosol, plastid	52.4	51.42
CDX78047	Canola	plastid	51.44	51.2
Bra033466.1-P	Field mustard	cytosol, plastid	51.92	50.94
Solyc01g068250.2.1	Tomato	cytosol	50.48	50.48
CDX73675	Canola	cytosol, mitochondrion, plastid	51.2	50.24
Bra006883.1-P	Field mustard	plastid	51.2	50.24
TraesCS5A01G063900.1	Wheat	cytosol	35.1	32.37
TraesCS4A01G242800.1	Wheat	plastid	35.58	31.76
TraesCS4A01G242900.1	Wheat	plastid	36.54	31.34
TraesCS5A01G379200.1	Wheat	cytosol	32.45	28.3
TraesCS2A01G324000.1	Wheat	plastid	28.85	27.09
TraesCS7A01G195200.1	Wheat	cytosol	29.57	24.7
TraesCS3A01G156000.1	Wheat	cytosol	27.88	22.92

Protein Annotations

EnsemblPlants:TraesCS3A01G485100.1	EnsemblPlantsGene:TraesCS3A01G485100	Gene3D:2.130.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_dom
InterPro:WD40_repeat_dom_sf	PANTHER:PTHR22844	PANTHER:PTHR22844:SF223	PFAM:PF00400	PFscan:PS50082	PFscan:PS50294
SEG:seg	SMART:SM00320	SUPFAM:SSF50978	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr3A:+:714458228..714459478

Molecular Weight (calculated)

43578.6 Da

IEP (calculated)

9.551

GRAVY (calculated)

-0.068

Length

416 amino acids

Sequence
(BLAST)

001: MSEPLLPWPA SLPSSASSSF SASASSHSFS ASSSPADAAP ARGEPSAAWK ALAVLRDAHS PGAGSVSCLS LCGEFLLSAS TGADIVAWQQ PDLRLFARFG
101: HGGEGAVKAL AAAGGRVFSA HQDGRVRVWR VSRRSENAFK LVAALPTTRD YLGRVFRQAS YVQAGPRRGR RGGRRLWIEH ADSISCLAVA AQDGVVYSGS
201: WDRTLKVWRM SDLRCLESVR AHDDAINAVA ADCGVVYSAS ADGRVKAWER GKAGAGAHTL LAVLVARDGV SWNAVAASGD AGAAGRRVYA AGSDGHVLAW
301: HRHGTRWSLA CDVKAHAMAV LCMCMAGDLV CTGSADKTIG LWRRQPCGGL AKVGAVGGHE GPVKCIQASL CRASNGYMVY SGGLDKSIRV WWVPNGANGD
401: ERPRETNGAI RVPACS

Best Arabidopsis Sequence Match ( AT3G51930.1 )
(BLAST)

001: MVRSIQEGVL MSSSSSSTTS NSNDSDGSLS PSASTKSFVL NTLRPPITGA YKPLAVLSAH VGSVSSLALC GEFLLSASQG KDIIVWQQPD LKIFAKFGQG
101: DGSVKALVSV GSKVFTAHQD SRIRVWKVSR RNSENAFRLV DTLPTTKDYL GKFMKQSNYV QTRRNHKRLW IEHADSISCL AVHAGIIYSG SWDKTLKVWR
201: LSDLKCLESI KAHDDAINGL VAGDGRVYSA SADGKVKIWG KEKRKQIEST SSSSSSLHVL KATLEGRAEV SVNSVVVSGD GNWVYGGGSD GFVIGWEKKE
301: KEGDFEEWRL GFETRGHNMA VLCMCVVGEM VCSGSADKSI GLWRREVTGM LCKFGVIHGH EGPVKCLQAS PNNVGAGFML YSGGLDKSLR VWWVPKQDNL
401: EEKKSSFKTL LTQKE

Arabidopsis Description

At3g51930 [Source:UniProtKB/TrEMBL;Acc:Q9SV11]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.