Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES07284 | Sorghum | cytosol | 87.36 | 71.33 |
| Os02t0740900-01 | Rice | plastid | 69.94 | 61.18 |
| GSMUA_Achr6P36100_001 | Banana | cytosol | 53.65 | 48.6 |
| GSMUA_Achr7P19910_001 | Banana | cytosol | 52.53 | 42.5 |
| KRH57017 | Soybean | plastid | 43.82 | 39.59 |
| Bra024637.1-P | Field mustard | plastid | 44.66 | 38.97 |
| CDY16242 | Canola | plastid | 44.38 | 38.63 |
| PGSC0003DMT400062862 | Potato | cytosol | 42.7 | 38.58 |
| CDY14665 | Canola | plastid | 44.1 | 38.57 |
| VIT_17s0000g07690.t01 | Wine grape | nucleus, plastid | 43.82 | 38.42 |
| AT1G24130.1 | Thale cress | cytosol, plastid | 44.66 | 38.31 |
| KRH63468 | Soybean | plastid | 44.38 | 37.8 |
| CDY21432 | Canola | cytosol, nucleus, plastid | 41.01 | 37.63 |
| Bra000611.1-P | Field mustard | nucleus | 41.01 | 37.53 |
| CDY70872 | Canola | nucleus | 40.45 | 37.4 |
| Solyc05g006340.2.1 | Tomato | cytosol | 43.54 | 37.35 |
| VIT_01s0026g00880.t01 | Wine grape | cytosol | 44.66 | 37.24 |
| KRH54449 | Soybean | plastid | 42.7 | 36.1 |
| AT5G50120.1 | Thale cress | nucleus | 39.33 | 36.08 |
| KRH74694 | Soybean | nucleus | 43.82 | 36.03 |
| KRH03365 | Soybean | nucleus, plastid | 41.01 | 35.96 |
| PGSC0003DMT400040333 | Potato | cytosol | 43.26 | 35.73 |
| Solyc04g005020.2.1 | Tomato | plastid | 42.42 | 35.2 |
| PGSC0003DMT400004842 | Potato | plastid | 42.42 | 35.03 |
| KRH69465 | Soybean | nucleus | 42.42 | 34.4 |
| Zm00001d003272_P001 | Maize | cytosol, plastid | 42.98 | 33.92 |
| Zm00001d025699_P001 | Maize | plastid | 42.13 | 33.19 |
| Solyc03g113850.1.1 | Tomato | cytosol, plastid | 42.42 | 31.86 |
| Zm00001d041381_P001 | Maize | cytosol, mitochondrion | 35.39 | 26.69 |
| Zm00001d042132_P001 | Maize | plastid | 28.65 | 25.37 |
| Zm00001d033304_P001 | Maize | mitochondrion, plastid | 32.87 | 24.32 |
| Zm00001d009003_P001 | Maize | cytosol | 30.62 | 20.96 |
| Zm00001d039292_P001 | Maize | cytosol | 30.62 | 20.41 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:35.1 | UniProt:A0A1D6HJU5 | ProteinID:AQK74731.1 | InterPro:G-protein_beta_WD-40_rep | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 | PFAM:PF00400 |
| PRINTS:PR00320 | PFscan:PS50082 | PFscan:PS50294 | PFscan:PS51257 | PANTHER:PTHR22844 | PANTHER:PTHR22844:SF278 |
| SMART:SM00320 | SUPFAM:SSF50978 | UniParc:UPI000842B7DA | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom |
| InterPro:WD40_repeat_dom_sf | EnsemblPlantsGene:Zm00001d017994 | EnsemblPlants:Zm00001d017994_P001 | EnsemblPlants:Zm00001d017994_T001 | SEG:seg | : |
Description
Transducin/WD40 repeat-like superfamily protein
Coordinates
chr5:+:211567137..211568207
Molecular Weight (calculated)
37760.6 Da
IEP (calculated)
8.575
GRAVY (calculated)
-0.200
Length
356 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDASGRQDD DDDDSGGGGG GGCGSATVVA ACDSSVKCLL ATAGSNGHGL LLSSHQDGKI MAWRTGSGRK DGTPSLVLRA VLPTCVDRLR TFLLPWSYVQ
101: VRRHRWRTWV HHVDAVAALA VSPDGALLYS ASWDRSLRVW RLPGFRCVES VAPAHDDAIN ALAVSPDGHV YTGSADNKIK AWRRHPERRH RHRHRHVLVL
201: VQTMERHRSA VNALALGADG RVLYSGACDR SVVVWERADG AGGGRMEATG TLRGHTRAIL CLAAAGDVVC SGSADRTVRV WRRGAENTGY TLLAVLEGHG
301: APVKSLALLY GRDRGLFSGW GDPEEGSSGG GGGTHCAIVC SGALDGEVKI WSTLVP
101: VRRHRWRTWV HHVDAVAALA VSPDGALLYS ASWDRSLRVW RLPGFRCVES VAPAHDDAIN ALAVSPDGHV YTGSADNKIK AWRRHPERRH RHRHRHVLVL
201: VQTMERHRSA VNALALGADG RVLYSGACDR SVVVWERADG AGGGRMEATG TLRGHTRAIL CLAAAGDVVC SGSADRTVRV WRRGAENTGY TLLAVLEGHG
301: APVKSLALLY GRDRGLFSGW GDPEEGSSGG GGGTHCAIVC SGALDGEVKI WSTLVP
001: MGLLPCSCPL PCNETRSECE TKSTHHQSES STSSSLLSQP SLPLVPSLSF QHQSSSVDHH CLATLKDKSS YVSSLAVSDK LLYTGSSNSE IRVWPREPPF
101: SPEYSTGDDR NVVANGNGGV KSLVILGDKL ISAHQDHKIR VWKIIDESNR RGQKYKCVAT LPTMNDRFKT LFSSKSYVEV RRHKKCTWVH HVDAVSSLAL
201: SQDGSLLYSA SWDRSFKIWR TSDFKCLDSI EKAHDDAINA IVVSKDGFVY TGSADKKIKV WNKKDKKHSL VATLTKHLSA VNALAISEDG KVLYSGACDR
301: SILVWERLIN GDDEELHMSV VGALRGHRKA IMCLAVASDL VLSGSADKSL RVWRRGLMEK EGYSCLAVLE GHTKPVKSLA VSVSDSDSNS DYSCMVYSGS
401: LDLSLKVWNL RVSSI
101: SPEYSTGDDR NVVANGNGGV KSLVILGDKL ISAHQDHKIR VWKIIDESNR RGQKYKCVAT LPTMNDRFKT LFSSKSYVEV RRHKKCTWVH HVDAVSSLAL
201: SQDGSLLYSA SWDRSFKIWR TSDFKCLDSI EKAHDDAINA IVVSKDGFVY TGSADKKIKV WNKKDKKHSL VATLTKHLSA VNALAISEDG KVLYSGACDR
301: SILVWERLIN GDDEELHMSV VGALRGHRKA IMCLAVASDL VLSGSADKSL RVWRRGLMEK EGYSCLAVLE GHTKPVKSLA VSVSDSDSNS DYSCMVYSGS
401: LDLSLKVWNL RVSSI
Arabidopsis Description
F3I6.5 protein [Source:UniProtKB/TrEMBL;Acc:O48679]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.