Factsheet for TraesCS7B01G189300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G293500.1	Wheat	golgi	99.74	99.74
TraesCS7A01G296100.6	Wheat	cytosol	99.56	99.56
HORVU7Hr1G066930.5	Barley	cytosol	98.86	98.86
Os08t0162100-01	Rice	nucleus	92.18	92.59
KXG24503	Sorghum	cytosol	92.0	92.0
Zm00001d024523_P003	Maize	cytosol	91.74	90.55
GSMUA_Achr4P11600_001	Banana	cytosol	84.36	84.36
GSMUA_Achr4P05650_001	Banana	cytosol	83.48	83.85
GSMUA_Achr4P12340_001	Banana	cytosol	83.83	83.83
GSMUA_Achr1P10830_001	Banana	cytosol	82.6	82.31
GSMUA_Achr1P15450_001	Banana	cytosol	58.88	81.51
VIT_16s0039g02410.t01	Wine grape	cytosol	79.79	80.0
GSMUA_Achr4P04560_001	Banana	cytosol	81.63	79.54
Solyc08g076030.2.1	Tomato	nucleus	75.57	75.77
TraesCS4B01G220900.3	Wheat	cytosol	67.31	67.43
TraesCS3B01G204200.3	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	63.01	63.12
GSMUA_AchrUn_...	Banana	cytosol	61.25	60.98

Protein Annotations

MapMan:11.2.2.2	MapMan:15.5.53.1	Gene3D:2.130.10.10	InterPro:CTLH_C	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:Haem_d1_sf	InterPro:IPR001680	InterPro:IPR006594	InterPro:IPR006595	InterPro:IPR015943
InterPro:IPR017986	InterPro:LisH	PFAM:PF00400	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294
PFscan:PS50896	PFscan:PS50897	PANTHER:PTHR44083	PANTHER:PTHR44083:SF5	SMART:SM00320	SMART:SM00667
SMART:SM00668	SUPFAM:SSF50978	SUPFAM:SSF51004	InterPro:Topless_fam	EnsemblPlantsGene:TraesCS7B01G189300	EnsemblPlants:TraesCS7B01G189300.1
InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg

Description

No Description!

Coordinates

chr7B:-:323199373..323210541

Molecular Weight (calculated)

125337.0 Da

IEP (calculated)

7.224

GRAVY (calculated)

-0.336

Length

1138 amino acids

Sequence
(BLAST)

0001: MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFYFNMKH FEDLVQGGEW DEVERYLSGF TKVEDNRYSM KIFFEIRKQK YLEALDRHDR AKAVEILVKD
0101: LKVFASFNEE LFKEITQLLT LDNFRQNEQL SKYGDTKSAR NIMLMELKKL IEANPLFRDK LNFPPFKASR LRTLINQSLN WQHQLCKNPR PNPDIKTLFT
0201: DHSCAAPTNG ARAPPPANGP LVGPIPKTAG FPPMGAHAPF QPVVSPSPNA IAGWMTNPNP SLPHPAIAQG PPGLVQPPNT AAFLKHPRTP TSAPGIDYQS
0301: ADSEHLMKRM RVGQPDEVSF SGASHPPNVY SQEDLPKQVV RTLNQGSNVM SLDFHPVQQT ILLVGTNVGD IGIWEVGSRE RIAHKTFKVW DIGSCTLPLQ
0401: AALMKDAAIC VNRCLWSPDG NILGVAFSKH IVQTYTFVPN GELRQQAEID AHIGGVNDIA FSHPNKSLSI ITCGDDKLIK VWDAQSGQKQ YTFEGHEASV
0501: YSVCPHYKEN IQFIFSTAID GKIKAWLYDC LGSRVDYDAP GHWCTTMSYS ADGTRLFSCG TSKDGDSHLV EWNETEGAIK RTYNGFRKRS LGVVQFDTTR
0601: NHFLAAGDEF VVKFWDMDNT NILTTTDCEG GLPASPRLRF NREGSLLAVT ANDNGIKILA NTDGQRLLRM LESRAFEGSR GPPQQINTKP PLLTNLGSAS
0701: NVSSPIAVNA ERPDRMLPAV SMSGLASMDV SRTPDVKPRI TEESEKLKTW KLADIVDSGH LRARRCPDTA ASPTKVARLL YTNSGVALLS LGSNAVHKLW
0801: KWQRSDRNPN GKSTASISPH LWQPANGILM TNDTSDGNPE EATACIALSK NDSYVMSASG GKVSLFNMMT FKVMTTFMAP PPAATFLAFH PQDNNIIAIG
0901: MEDSTIQIYN VRVDEVKSKL KGHQKKITGL AFSQSMNVLV SSGADAQLCV WSIDGWEKKK SKYIQPPANR SGALVGDTRV QFHNDQTHLL VVHESQLAIY
1001: DGNLECSRSW YPRDALPAPV SSAIYSCDGL LVYAGFCDGA IGVFEAESLR LRCRIALSAY VPPSISSGAS VYPMVVAAHP LEPNQIAVGM SDGAVHVVEP
1101: LDADPKWGVA PPQDNGAHPS MSSAPAASNN QTSDQPTR

Best Arabidopsis Sequence Match ( AT1G15750.1 )
(BLAST)

0001: MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMKY FEDEVHNGNW DEVEKYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDKHDR PKAVDILVKD
0101: LKVFSTFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR AIMLVELKKL IEANPLFRDK LQFPTLRNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCGPPNGA RAPSPVNNPL LGGIPKAGGF PPLGAHGPFQ PTASPVPTPL AGWMSSPSSV PHPAVSAGAI ALGGPSIPAA LKHPRTPPTN ASLDYPSADS
0301: EHVSKRTRPM GISDEVNLGV NMLPMSFSGQ AHGHSPAFKA PDDLPKTVAR TLSQGSSPMS MDFHPIKQTL LLVGTNVGDI GLWEVGSRER LVQKTFKVWD
0401: LSKCSMPLQA ALVKEPVVSV NRVIWSPDGS LFGVAYSRHI VQLYSYHGGE DMRQHLEIDA HVGGVNDISF STPNKQLCVI TCGDDKTIKV WDAATGVKRH
0501: TFEGHEAPVY SVCPHYKENI QFIFSTALDG KIKAWLYDNM GSRVDYDAPG RWCTTMAYSA DGTRLFSCGT SKDGESFIVE WNESEGAVKR TYQGFHKRSL
0601: GVVQFDTTKN RYLAAGDDFS IKFWDMDAVQ LLTAIDGDGG LQASPRIRFN KEGSLLAVSG NENVIKIMAN SDGLRLLHTF ENISSESSKP AINSIAAAAA
0701: AAATSAGHAD RSANVVSIQG MNGDSRNMVD VKPVITEESN DKSKIWKLTE VSEPSQCRSL RLPENLRVAK ISRLIFTNSG NAILALASNA IHLLWKWQRN
0801: ERNATGKATA SLPPQQWQPA SGILMTNDVA ETNPEEAVPC FALSKNDSYV MSASGGKISL FNMMTFKTMA TFMPPPPAAT FLAFHPQDNN IIAIGMDDST
0901: IQIYNVRVDE VKSKLKGHSK RITGLAFSNV LNVLVSSGAD AQLCVWNTDG WEKQRSKVLP LPQGRPNSAP SDTRVQFHQD QAHFLVVHET QLAIYETTKL
1001: ECMKQWAVRE SLAPITHATF SCDSQLVYAS FMDATVCVFS SANLRLRCRV NPSAYLPASL SNSNVHPLVI AAHPQEPNMF AVGLSDGGVH IFEPLESEGK
1101: WGVAPPAENG SASGAPTAPS VGASASDQPQ R

Arabidopsis Description

TPLProtein TOPLESS [Source:UniProtKB/Swiss-Prot;Acc:Q94AI7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.