Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P12340_001 | Banana | cytosol | 63.78 | 64.06 |
| GSMUA_Achr4P05650_001 | Banana | cytosol | 63.34 | 63.9 |
| GSMUA_Achr1P15450_001 | Banana | cytosol | 45.93 | 63.87 |
| GSMUA_Achr4P11600_001 | Banana | cytosol | 63.52 | 63.8 |
| GSMUA_Achr1P10830_001 | Banana | cytosol | 62.29 | 62.35 |
| KXG24503 | Sorghum | cytosol | 62.03 | 62.3 |
| Os08t0162100-01 | Rice | nucleus | 61.24 | 61.78 |
| TraesCS7D01G293500.1 | Wheat | golgi | 61.07 | 61.34 |
| TraesCS7A01G296100.6 | Wheat | cytosol | 61.07 | 61.34 |
| TraesCS7B01G189300.1 | Wheat | cytosol | 60.98 | 61.25 |
| Zm00001d024523_P003 | Maize | cytosol | 61.68 | 61.14 |
| HORVU7Hr1G066930.5 | Barley | cytosol | 60.8 | 61.07 |
| GSMUA_Achr4P04560_001 | Banana | cytosol | 62.12 | 60.79 |
| VIT_16s0039g02410.t01 | Wine grape | cytosol | 59.49 | 59.91 |
| Solyc08g076030.2.1 | Tomato | nucleus | 58.36 | 58.77 |
| GSMUA_Achr1P15460_001 | Banana | endoplasmic reticulum, extracellular | 19.77 | 56.93 |
| GSMUA_Achr4P09920_001 | Banana | cytosol | 52.93 | 52.61 |
| GSMUA_Achr6P36440_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 52.93 | 52.43 |
| GSMUA_Achr11P... | Banana | cytosol | 49.26 | 49.6 |
| GSMUA_Achr6P22950_001 | Banana | plasma membrane | 53.02 | 48.95 |
| GSMUA_Achr2P00320_001 | Banana | cytosol | 49.17 | 47.11 |
Protein Annotations
| MapMan:11.2.2.2 | MapMan:15.5.53.1 | Gene3D:2.130.10.10 | InterPro:CTLH_C | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_AchrUn_randomG07780_001 | EnsemblPlants:GSMUA_AchrUn_randomP07780_001 | EnsemblPlants:GSMUA_AchrUn_randomT07780_001 | InterPro:IPR001680 |
| InterPro:IPR006594 | InterPro:IPR006595 | InterPro:IPR015943 | InterPro:IPR017986 | InterPro:LisH | UniProt:M0U789 |
| PFAM:PF00400 | ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 | PFscan:PS50896 | PFscan:PS50897 |
| PANTHER:PTHR44083 | PANTHER:PTHR44083:SF5 | InterPro:Quinoprotein_ADH-like_supfam | SMART:SM00320 | SMART:SM00667 | SMART:SM00668 |
| SUPFAM:SSF50978 | SUPFAM:SSF50998 | InterPro:Topless_fam | UniParc:UPI000295FB13 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat |
| InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg | : | : |
Description
Topless-related protein 1 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG07780_001]
Coordinates
chrchrUn_random:-:32676331..32682729
Molecular Weight (calculated)
125372.0 Da
IEP (calculated)
7.261
GRAVY (calculated)
-0.307
Length
1143 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTALKEELIF LILQYLNEKK YKEAVHKLEQ ESGCYFNMKY FGDLVQEGNW DEAEKYLGSF TKLEDNRHSV KIYFEIRKQK YLEALDMSDR GKAIDILRKD
0101: LKVFASFNEE LYKEMVQLLA LENFRQNQQL SKYGDVKSAR NNMWVELKKL FEANPVFRDK LKFPPCESRL ESLIKQSLRW QHQQCPNPRP SPTFHTLYTD
0201: HTCPTDGARG PAPRNVQLMG PPNPRAETLP PMDSHTPLPL VVSPSASATQ RWMAIANPPL PHDAAAAAAQ VPSAAFFKHP RTPTNAPPGG GDNQTLESER
0301: LWKRLRTAQT DEASFSGASH PPNIRPQDDI PKTVVRTLNQ GSNVMSLDFH PIHQTILLVG TNVGDVDIWE VGSKERIAHK TFKVWDMGSC SMPLQQSSLV
0401: KDATISVNRC LWSPDGSILG VAFSKHLVQT YAFSLNAELG QLLEIDAHVG SVNDIAFSHP DKSLSIVTCG EDKTIKVWDA TTGQKRYTFE GHDAPVYSVC
0501: ARHIESIEFI FSTGSDGKIK AWFYDGSGPK VEYDAPGHGC TTMAYGANGT RLFSCGTSKD GETHLVEWNE TNGRIKTTYS GFRNRPFGVV QFDTSRNLLA
0601: AGDENLIKFW DMDRAYMLTS TDADGGLPAS PRLRLNGEGS LLAVATSDDG IKILANTDGQ RSLTTREKRP PEEATVDGTT AADVKLRIPG DNGWKSSDIV
0701: DSARLRALRL PDSTTASEVV QLLYTNSGIA VLGLGSNGVH KLWTWARVDH NPSGKSNASV APRLWQPSNG AVMINDTTGA NPEEGTSCMA LSNNDSYVIS
0801: ASGGNVSLFS LVASKLMTTL LSPPPVPTFL AFHPQNNNMI AIGTEDSSIL IYNAQTATVT ADLKGHQKKI TGLAFSRSLD VLLSSGADAQ LCMWSIDGWE
0901: KKMSRFIQAP ASHAAAAAPL DGDTKVQFHK NHPHLLVVHA SQLSIYDSKL ECMHSWSPRD ALAASISSAT YSCDGLLVHA GFRDGAVGIF EADGLKLRCR
1001: IAPSAYLSPS MQKSCCCISC GDCCPPIRTK PDSTGNERWR RSRAGALGCC ASQGKSRSPI HPSPILILLP SDHQTSGPPL SSSLFLYNNC AKRGTNERTD
1101: SSFFLSFIIL PPFTVSDCSI CGGWVGFCIV CNRYTCCFVV CDL
0101: LKVFASFNEE LYKEMVQLLA LENFRQNQQL SKYGDVKSAR NNMWVELKKL FEANPVFRDK LKFPPCESRL ESLIKQSLRW QHQQCPNPRP SPTFHTLYTD
0201: HTCPTDGARG PAPRNVQLMG PPNPRAETLP PMDSHTPLPL VVSPSASATQ RWMAIANPPL PHDAAAAAAQ VPSAAFFKHP RTPTNAPPGG GDNQTLESER
0301: LWKRLRTAQT DEASFSGASH PPNIRPQDDI PKTVVRTLNQ GSNVMSLDFH PIHQTILLVG TNVGDVDIWE VGSKERIAHK TFKVWDMGSC SMPLQQSSLV
0401: KDATISVNRC LWSPDGSILG VAFSKHLVQT YAFSLNAELG QLLEIDAHVG SVNDIAFSHP DKSLSIVTCG EDKTIKVWDA TTGQKRYTFE GHDAPVYSVC
0501: ARHIESIEFI FSTGSDGKIK AWFYDGSGPK VEYDAPGHGC TTMAYGANGT RLFSCGTSKD GETHLVEWNE TNGRIKTTYS GFRNRPFGVV QFDTSRNLLA
0601: AGDENLIKFW DMDRAYMLTS TDADGGLPAS PRLRLNGEGS LLAVATSDDG IKILANTDGQ RSLTTREKRP PEEATVDGTT AADVKLRIPG DNGWKSSDIV
0701: DSARLRALRL PDSTTASEVV QLLYTNSGIA VLGLGSNGVH KLWTWARVDH NPSGKSNASV APRLWQPSNG AVMINDTTGA NPEEGTSCMA LSNNDSYVIS
0801: ASGGNVSLFS LVASKLMTTL LSPPPVPTFL AFHPQNNNMI AIGTEDSSIL IYNAQTATVT ADLKGHQKKI TGLAFSRSLD VLLSSGADAQ LCMWSIDGWE
0901: KKMSRFIQAP ASHAAAAAPL DGDTKVQFHK NHPHLLVVHA SQLSIYDSKL ECMHSWSPRD ALAASISSAT YSCDGLLVHA GFRDGAVGIF EADGLKLRCR
1001: IAPSAYLSPS MQKSCCCISC GDCCPPIRTK PDSTGNERWR RSRAGALGCC ASQGKSRSPI HPSPILILLP SDHQTSGPPL SSSLFLYNNC AKRGTNERTD
1101: SSFFLSFIIL PPFTVSDCSI CGGWVGFCIV CNRYTCCFVV CDL
0001: MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMKY FEDEVHNGNW DEVEKYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDKHDR PKAVDILVKD
0101: LKVFSTFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR AIMLVELKKL IEANPLFRDK LQFPTLRNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCGPPNGA RAPSPVNNPL LGGIPKAGGF PPLGAHGPFQ PTASPVPTPL AGWMSSPSSV PHPAVSAGAI ALGGPSIPAA LKHPRTPPTN ASLDYPSADS
0301: EHVSKRTRPM GISDEVNLGV NMLPMSFSGQ AHGHSPAFKA PDDLPKTVAR TLSQGSSPMS MDFHPIKQTL LLVGTNVGDI GLWEVGSRER LVQKTFKVWD
0401: LSKCSMPLQA ALVKEPVVSV NRVIWSPDGS LFGVAYSRHI VQLYSYHGGE DMRQHLEIDA HVGGVNDISF STPNKQLCVI TCGDDKTIKV WDAATGVKRH
0501: TFEGHEAPVY SVCPHYKENI QFIFSTALDG KIKAWLYDNM GSRVDYDAPG RWCTTMAYSA DGTRLFSCGT SKDGESFIVE WNESEGAVKR TYQGFHKRSL
0601: GVVQFDTTKN RYLAAGDDFS IKFWDMDAVQ LLTAIDGDGG LQASPRIRFN KEGSLLAVSG NENVIKIMAN SDGLRLLHTF ENISSESSKP AINSIAAAAA
0701: AAATSAGHAD RSANVVSIQG MNGDSRNMVD VKPVITEESN DKSKIWKLTE VSEPSQCRSL RLPENLRVAK ISRLIFTNSG NAILALASNA IHLLWKWQRN
0801: ERNATGKATA SLPPQQWQPA SGILMTNDVA ETNPEEAVPC FALSKNDSYV MSASGGKISL FNMMTFKTMA TFMPPPPAAT FLAFHPQDNN IIAIGMDDST
0901: IQIYNVRVDE VKSKLKGHSK RITGLAFSNV LNVLVSSGAD AQLCVWNTDG WEKQRSKVLP LPQGRPNSAP SDTRVQFHQD QAHFLVVHET QLAIYETTKL
1001: ECMKQWAVRE SLAPITHATF SCDSQLVYAS FMDATVCVFS SANLRLRCRV NPSAYLPASL SNSNVHPLVI AAHPQEPNMF AVGLSDGGVH IFEPLESEGK
1101: WGVAPPAENG SASGAPTAPS VGASASDQPQ R
0101: LKVFSTFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR AIMLVELKKL IEANPLFRDK LQFPTLRNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCGPPNGA RAPSPVNNPL LGGIPKAGGF PPLGAHGPFQ PTASPVPTPL AGWMSSPSSV PHPAVSAGAI ALGGPSIPAA LKHPRTPPTN ASLDYPSADS
0301: EHVSKRTRPM GISDEVNLGV NMLPMSFSGQ AHGHSPAFKA PDDLPKTVAR TLSQGSSPMS MDFHPIKQTL LLVGTNVGDI GLWEVGSRER LVQKTFKVWD
0401: LSKCSMPLQA ALVKEPVVSV NRVIWSPDGS LFGVAYSRHI VQLYSYHGGE DMRQHLEIDA HVGGVNDISF STPNKQLCVI TCGDDKTIKV WDAATGVKRH
0501: TFEGHEAPVY SVCPHYKENI QFIFSTALDG KIKAWLYDNM GSRVDYDAPG RWCTTMAYSA DGTRLFSCGT SKDGESFIVE WNESEGAVKR TYQGFHKRSL
0601: GVVQFDTTKN RYLAAGDDFS IKFWDMDAVQ LLTAIDGDGG LQASPRIRFN KEGSLLAVSG NENVIKIMAN SDGLRLLHTF ENISSESSKP AINSIAAAAA
0701: AAATSAGHAD RSANVVSIQG MNGDSRNMVD VKPVITEESN DKSKIWKLTE VSEPSQCRSL RLPENLRVAK ISRLIFTNSG NAILALASNA IHLLWKWQRN
0801: ERNATGKATA SLPPQQWQPA SGILMTNDVA ETNPEEAVPC FALSKNDSYV MSASGGKISL FNMMTFKTMA TFMPPPPAAT FLAFHPQDNN IIAIGMDDST
0901: IQIYNVRVDE VKSKLKGHSK RITGLAFSNV LNVLVSSGAD AQLCVWNTDG WEKQRSKVLP LPQGRPNSAP SDTRVQFHQD QAHFLVVHET QLAIYETTKL
1001: ECMKQWAVRE SLAPITHATF SCDSQLVYAS FMDATVCVFS SANLRLRCRV NPSAYLPASL SNSNVHPLVI AAHPQEPNMF AVGLSDGGVH IFEPLESEGK
1101: WGVAPPAENG SASGAPTAPS VGASASDQPQ R
Arabidopsis Description
TPLProtein TOPLESS [Source:UniProtKB/Swiss-Prot;Acc:Q94AI7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.