CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024523_P003	Maize	cytosol	98.77	97.48
Os08t0162100-01	Rice	nucleus	92.0	92.41
TraesCS7D01G293500.1	Wheat	golgi	92.09	92.09
TraesCS7A01G296100.6	Wheat	cytosol	92.09	92.09
TraesCS7B01G189300.1	Wheat	cytosol	92.0	92.0
HORVU7Hr1G066930.5	Barley	cytosol	91.83	91.83
GSMUA_Achr4P05650_001	Banana	cytosol	84.36	84.73
GSMUA_Achr4P11600_001	Banana	cytosol	84.62	84.62
GSMUA_Achr4P12340_001	Banana	cytosol	84.45	84.45
GSMUA_Achr1P10830_001	Banana	cytosol	82.95	82.66
GSMUA_Achr1P15450_001	Banana	cytosol	59.31	82.12
VIT_16s0039g02410.t01	Wine grape	cytosol	79.79	80.0
GSMUA_Achr4P04560_001	Banana	cytosol	82.07	79.97
Solyc08g076030.2.1	Tomato	nucleus	75.66	75.86
EER92538	Sorghum	cytosol	68.54	69.33
KXG32191	Sorghum	cytosol	63.71	64.44
GSMUA_AchrUn_...	Banana	cytosol	62.3	62.03
KXG21335	Sorghum	cytosol	26.71	33.55

Protein Annotations

MapMan:11.2.2.2	MapMan:15.5.53.1	Gene3D:2.130.10.10	UniProt:A0A1B6PFN9	InterPro:CTLH_C	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR001680	InterPro:IPR006594	InterPro:IPR006595	InterPro:IPR015943
InterPro:IPR017986	EnsemblPlants:KXG24503	ProteinID:KXG24503	ProteinID:KXG24503.1	InterPro:LisH	InterPro:N2O_reductase_N
PFAM:PF00400	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PFscan:PS50896	PFscan:PS50897
PANTHER:PTHR44083	PANTHER:PTHR44083:SF5	InterPro:Quinoprotein_ADH-like_supfam	SMART:SM00320	SMART:SM00667	SMART:SM00668
EnsemblPlantsGene:SORBI_3007G051700	SUPFAM:SSF50974	SUPFAM:SSF50978	SUPFAM:SSF50998	InterPro:Topless_fam	UniParc:UPI0003C692D2
InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg

Description

hypothetical protein

Coordinates

chr7:+:5282384..5291841

Molecular Weight (calculated)

125305.0 Da

IEP (calculated)

7.228

GRAVY (calculated)

-0.316

Length

1138 amino acids

Sequence
(BLAST)

0001: MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFYFNMKH FEDLVQGGEW DEVEKYLSGF TKVEDNRYSM KIFFEIRKQK YLEALDRHDR AKAVEILVKD
0101: LKVFASFNEE LFKEITQLLT LENFRQNEQL SKYGDTKSAR NIMLLELKKL IEANPLFRDK LNFPPFKASR LRTLINQSLN WQHQLCKNPR PNPDIKTLFT
0201: DHSCAAPTNG ARAPPPANGP LVGSIPKSAG FPPMGAHAPF QPVVSPSPNA IAGWMTNANP SLPHAAVAQG PPGLVQAPNT AAFLKHPRTP TSAPGIDYQS
0301: ADSEHLMKRM RVGQPDEVSF SGASHPANMY TQEDLPKQVS RTLNQGSNVM SLDFHPVQQT ILLVGTNVGD IAVWEVGSRE RIAHKTFKVW DIGSCTLPLQ
0401: ASLMKDAAIS VNRCLWSPDG TILGVAFSKH IVQTYTFVPN GDLRQQAEID AHIGGVNDIA FSHPNKTLSI ITCGDDKLIK VWDAQTGQKQ YTFEGHEAPV
0501: YSVCPHYKES IQFIFSTAID GKIKAWLYDC LGSRVDYDAP GHWCTTMAYS ADGTRLFSCG TSKEGDSHLV EWNETEGAIK RTYNGFRKRS LGVVQFDTTR
0601: NRFLAAGDEF LVKFWDMDNN NILTTTDCDG GLPASPRLRF NREGSLLAVT TSDNGIKILA NTDGQRLLRM LESRAFEGSR GPPQQINTKP PIVALGPVSN
0701: VSSPIAVNAE RPDRILPAVS TSGLAPMDPS RTPDVKPRIT DESEKVKTWK LADIVDNGHL RALHLTDTDT NPSKVVRLLY TNNGIALLAL GSNAVHKLWK
0801: WQRGDRNPSG KSTASVAPHL WQPANGILMT NDTNDGNPEE ATACIALSKN DSYVMSASGG KVSLFNMMTF KVMTTFMAPP PAATFLAFHP QDNNIIAIGM
0901: EDSTIQIYNV RIDDVKSKLK GHQKKITGLA FSQSMNVLVS SGADAQLCVW SIDGWEKKKS RYIQPPANRP GTLVGDTRVQ FHNDQTHLLV VHESQLAIYD
1001: GNLECLRSWS PRDALPAPIS SAIYSCDGLL VYAAFCDGAI GVFEAESLRL RCRIAPSAYI PPSILACAGR VYPLVVAAHP MEPNQIALGM SDGKVHVVEP
1101: LDGDPKWGTA PPQDNGVHPA ISAAPSAATN QASDQPTR

Best Arabidopsis Sequence Match ( AT1G15750.3 )
(BLAST)

0001: MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMKY FEDEVHNGNW DEVEKYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDKHDR PKAVDILVKD
0101: LKVFSTFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR AIMLVELKKL IEANPLFRDK LQFPTLRNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCGPPNGA RAPSPVNNPL LGGIPKAGGF PPLGAHGPFQ PTASPVPTPL AGWMSSPSSV PHPAVSAGAI ALGGPSIPAA LKHPRTPPTN ASLDYPSADS
0301: EHVSKRTRPM GISDEVNLGV NMLPMSFSGQ AHGHSPAFKA PDDLPKTVAR TLSQGSSPMS MDFHPIKQTL LLVGTNVGDI GLWEVGSRER LVQKTFKVWD
0401: LSKCSMPLQA ALVKEPVVSV NRVIWSPDGS LFGVAYSRHI VQLYSYHGGE DMRQHLEIDA HVGGVNDISF STPNKQLCVI TCGDDKTIKV WDAATGVKRH
0501: TFEGHEAPVY SVCPHYKENI QFIFSTALDG KIKAWLYDNM GSRVDYDAPG RWCTTMAYSA DGTRLFSCGT SKDGESFIVE WNESEGAVKR TYQGFHKRSL
0601: GVVQFDTTKN RYLAAGDDFS IKFWDMDAVQ LLTAIDGDGG LQASPRIRFN KEGSLLAVSG NENVIKIMAN SDGLRLLHTF ENISSESSKP AINSIAAAAA
0701: AAATSAGHAD RSANVVSIQG MNGDSRNMVD VKPVITEESN DKSKIWKLTE VSEPSQCRSL RLPENLRVAK ISRLIFTNSG NAILALASNA IHLLWKWQRN
0801: ERNATGKATA SLPPQQWQPA SGILMTNDVA ETNPEEAVPC FALSKNDSYV MSASGGKISL FNMMTFKTMA TFMPPPPAAT FLAFHPQDNN IIAIGMDDST
0901: IQIYNVRVDE VKSKLKGHSK RITGLAFSNV LNVLVSSGAD AQLCVWNTDG WEKQRSKVLP LPQGRPNSAP SDTRVQFHQD QAHFLVVHET QLAIYETTKL
1001: ECMKQWAVRE SLAPITHATF SCDSQLVYAS FMDATVCVFS SANLRLRCRV NPSAYLPASL SNSNVHPLVI AAHPQEPNMF AVGLSDGGVH IFEPLESEGK
1101: WGVAPPAENG SASGAPTAPS VGASASDQPQ R

Arabidopsis Description

TPLProtein TOPLESS [Source:UniProtKB/Swiss-Prot;Acc:Q94AI7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.