Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P11600_001 | Banana | cytosol | 84.06 | 60.72 |
| GSMUA_Achr4P12340_001 | Banana | cytosol | 83.82 | 60.54 |
| GSMUA_Achr4P05650_001 | Banana | cytosol | 83.21 | 60.37 |
| Os08t0162100-01 | Rice | nucleus | 82.0 | 59.49 |
| KXG24503 | Sorghum | cytosol | 82.12 | 59.31 |
| GSMUA_Achr1P10830_001 | Banana | cytosol | 82.36 | 59.28 |
| TraesCS7B01G189300.1 | Wheat | cytosol | 81.51 | 58.88 |
| TraesCS7D01G293500.1 | Wheat | golgi | 81.39 | 58.79 |
| TraesCS7A01G296100.6 | Wheat | cytosol | 81.39 | 58.79 |
| HORVU7Hr1G066930.5 | Barley | cytosol | 81.27 | 58.7 |
| Zm00001d024523_P003 | Maize | cytosol | 82.12 | 58.54 |
| GSMUA_Achr4P04560_001 | Banana | cytosol | 82.24 | 57.88 |
| VIT_16s0039g02410.t01 | Wine grape | cytosol | 76.76 | 55.59 |
| Solyc08g076030.2.1 | Tomato | nucleus | 74.82 | 54.19 |
| GSMUA_Achr4P09920_001 | Banana | cytosol | 65.21 | 46.61 |
| GSMUA_Achr6P36440_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 65.33 | 46.53 |
| GSMUA_AchrUn_... | Banana | cytosol | 63.87 | 45.93 |
| GSMUA_Achr6P22950_001 | Banana | plasma membrane | 64.48 | 42.81 |
| GSMUA_Achr11P... | Banana | cytosol | 56.45 | 40.88 |
| GSMUA_Achr2P00320_001 | Banana | cytosol | 58.15 | 40.07 |
| GSMUA_Achr1P15460_001 | Banana | endoplasmic reticulum, extracellular | 1.34 | 2.77 |
Protein Annotations
| MapMan:11.2.2.2 | MapMan:15.5.53.1 | Gene3D:2.130.10.10 | InterPro:CTLH_C | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:GSMUA_Achr1G15450_001 | EnsemblPlants:GSMUA_Achr1P15450_001 |
| EnsemblPlants:GSMUA_Achr1T15450_001 | InterPro:IPR001680 | InterPro:IPR006594 | InterPro:IPR006595 | InterPro:IPR015943 | InterPro:IPR017986 |
| InterPro:LisH | UniProt:M0S053 | PFAM:PF00400 | ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 |
| PFscan:PS50896 | PFscan:PS50897 | PANTHER:PTHR44083 | PANTHER:PTHR44083:SF5 | SMART:SM00320 | SMART:SM00667 |
| SMART:SM00668 | SUPFAM:SSF50978 | TMHMM:TMhelix | InterPro:Topless_fam | UniParc:UPI000296B312 | InterPro:WD40/YVTN_repeat-like_dom_sf |
| InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | : | : |
Description
Protein TOPLESS [Source:GMGC_GENE;Acc:GSMUA_Achr1G15450_001]
Coordinates
chr1:+:11611278..11617335
Molecular Weight (calculated)
91489.3 Da
IEP (calculated)
7.983
GRAVY (calculated)
-0.296
Length
822 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSLSRELVF LILQFLDEEK FKEAVHKLEQ ESGFYFNMKH FEDLVQAGEW DEVEKYLGGF TKVEDNRYSM KIFFEIRKQK YLEALDRHDR AKAVEILVKD
101: LKVFASFNED LFKEITQLLT LENFRQNEQL SKYGDTKSAR NIMLMELKKL IEANPLFRDK LTFPPFKSSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFT
201: DHSCAIPTNG ARGPPPTNGP LVGPIPKSGA FPPLSAHSPF QPVVSPPASA IAGWMTNANP SLSHAAVAQG PPGLVQPQTT AAFLKHPRTP TSTPGMDYQT
301: ADSEHLMKRL RTGQSDEVSF SGSSHPPNVY SQEDIPKTVA RTINQGSNVM SLDFHPIHQT ILLVGTNVGD VSIWEVGTKE RIAHKTFKVW DIGSFTVPLQ
401: SALMKDAIVS VNRCLWSPDG TILGVAFSKH IVHTYVFSLN GELRQQLEID AHVGGVNDIA FSHPKKSLSI ITCGDDKTIK VWDAATGQQQ YTFEGHETPV
501: YSVCPHYKES IQFIFSTAID GKIKAWLYDC LGSRVDYDAP GHWCTTMAYS SDGTRLFSCG TSKDGDSHLV EWNETEGAIK RTYSGFRKRS LGVVQFDTAR
601: NRFLAAGDEF MIKFWDMDNI NILTTTDADG GLPASPRLRF NREGSLLAVT TSDNGIKILA NTDGQRLVRM MEGRGCEGSR GPSQQISTNS KPPIINALGA
701: VSNVSSPIIA TPERPDRTLP AVSMSSLAVV ESSRTTDVKP RIPEDTEKIR SWKLADIVDS AHLKALRLPD SMTASKPKLS KLVLLQSNLI KQNPCYIVYL
801: QLALLYFFFG NSGSHLVGLI ML
101: LKVFASFNED LFKEITQLLT LENFRQNEQL SKYGDTKSAR NIMLMELKKL IEANPLFRDK LTFPPFKSSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFT
201: DHSCAIPTNG ARGPPPTNGP LVGPIPKSGA FPPLSAHSPF QPVVSPPASA IAGWMTNANP SLSHAAVAQG PPGLVQPQTT AAFLKHPRTP TSTPGMDYQT
301: ADSEHLMKRL RTGQSDEVSF SGSSHPPNVY SQEDIPKTVA RTINQGSNVM SLDFHPIHQT ILLVGTNVGD VSIWEVGTKE RIAHKTFKVW DIGSFTVPLQ
401: SALMKDAIVS VNRCLWSPDG TILGVAFSKH IVHTYVFSLN GELRQQLEID AHVGGVNDIA FSHPKKSLSI ITCGDDKTIK VWDAATGQQQ YTFEGHETPV
501: YSVCPHYKES IQFIFSTAID GKIKAWLYDC LGSRVDYDAP GHWCTTMAYS SDGTRLFSCG TSKDGDSHLV EWNETEGAIK RTYSGFRKRS LGVVQFDTAR
601: NRFLAAGDEF MIKFWDMDNI NILTTTDADG GLPASPRLRF NREGSLLAVT TSDNGIKILA NTDGQRLVRM MEGRGCEGSR GPSQQISTNS KPPIINALGA
701: VSNVSSPIIA TPERPDRTLP AVSMSSLAVV ESSRTTDVKP RIPEDTEKIR SWKLADIVDS AHLKALRLPD SMTASKPKLS KLVLLQSNLI KQNPCYIVYL
801: QLALLYFFFG NSGSHLVGLI ML
0001: MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMKY FEDEVHNGNW DEVEKYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDKHDR PKAVDILVKD
0101: LKVFSTFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR AIMLVELKKL IEANPLFRDK LQFPTLRNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCGPPNGA RAPSPVNNPL LGGIPKAGGF PPLGAHGPFQ PTASPVPTPL AGWMSSPSSV PHPAVSAGAI ALGGPSIPAA LKHPRTPPTN ASLDYPSADS
0301: EHVSKRTRPM GISDEVNLGV NMLPMSFSGQ AHGHSPAFKA PDDLPKTVAR TLSQGSSPMS MDFHPIKQTL LLVGTNVGDI GLWEVGSRER LVQKTFKVWD
0401: LSKCSMPLQA ALVKEPVVSV NRVIWSPDGS LFGVAYSRHI VQLYSYHGGE DMRQHLEIDA HVGGVNDISF STPNKQLCVI TCGDDKTIKV WDAATGVKRH
0501: TFEGHEAPVY SVCPHYKENI QFIFSTALDG KIKAWLYDNM GSRVDYDAPG RWCTTMAYSA DGTRLFSCGT SKDGESFIVE WNESEGAVKR TYQGFHKRSL
0601: GVVQFDTTKN RYLAAGDDFS IKFWDMDAVQ LLTAIDGDGG LQASPRIRFN KEGSLLAVSG NENVIKIMAN SDGLRLLHTF ENISSESSKP AINSIAAAAA
0701: AAATSAGHAD RSANVVSIQG MNGDSRNMVD VKPVITEESN DKSKIWKLTE VSEPSQCRSL RLPENLRVAK ISRLIFTNSG NAILALASNA IHLLWKWQRN
0801: ERNATGKATA SLPPQQWQPA SGILMTNDVA ETNPEEAVPC FALSKNDSYV MSASGGKISL FNMMTFKTMA TFMPPPPAAT FLAFHPQDNN IIAIGMDDST
0901: IQIYNVRVDE VKSKLKGHSK RITGLAFSNV LNVLVSSGAD AQLCVWNTDG WEKQRSKVLP LPQGRPNSAP SDTRVQFHQD QAHFLVVHET QLAIYETTKL
1001: ECMKQWAVRE SLAPITHATF SCDSQLVYAS FMDATVCVFS SANLRLRCRV NPSAYLPASL SNSNVHPLVI AAHPQEPNMF AVGLSDGGVH IFEPLESEGK
1101: WGVAPPAENG SASGAPTAPS VGASASDQPQ R
0101: LKVFSTFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR AIMLVELKKL IEANPLFRDK LQFPTLRNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCGPPNGA RAPSPVNNPL LGGIPKAGGF PPLGAHGPFQ PTASPVPTPL AGWMSSPSSV PHPAVSAGAI ALGGPSIPAA LKHPRTPPTN ASLDYPSADS
0301: EHVSKRTRPM GISDEVNLGV NMLPMSFSGQ AHGHSPAFKA PDDLPKTVAR TLSQGSSPMS MDFHPIKQTL LLVGTNVGDI GLWEVGSRER LVQKTFKVWD
0401: LSKCSMPLQA ALVKEPVVSV NRVIWSPDGS LFGVAYSRHI VQLYSYHGGE DMRQHLEIDA HVGGVNDISF STPNKQLCVI TCGDDKTIKV WDAATGVKRH
0501: TFEGHEAPVY SVCPHYKENI QFIFSTALDG KIKAWLYDNM GSRVDYDAPG RWCTTMAYSA DGTRLFSCGT SKDGESFIVE WNESEGAVKR TYQGFHKRSL
0601: GVVQFDTTKN RYLAAGDDFS IKFWDMDAVQ LLTAIDGDGG LQASPRIRFN KEGSLLAVSG NENVIKIMAN SDGLRLLHTF ENISSESSKP AINSIAAAAA
0701: AAATSAGHAD RSANVVSIQG MNGDSRNMVD VKPVITEESN DKSKIWKLTE VSEPSQCRSL RLPENLRVAK ISRLIFTNSG NAILALASNA IHLLWKWQRN
0801: ERNATGKATA SLPPQQWQPA SGILMTNDVA ETNPEEAVPC FALSKNDSYV MSASGGKISL FNMMTFKTMA TFMPPPPAAT FLAFHPQDNN IIAIGMDDST
0901: IQIYNVRVDE VKSKLKGHSK RITGLAFSNV LNVLVSSGAD AQLCVWNTDG WEKQRSKVLP LPQGRPNSAP SDTRVQFHQD QAHFLVVHET QLAIYETTKL
1001: ECMKQWAVRE SLAPITHATF SCDSQLVYAS FMDATVCVFS SANLRLRCRV NPSAYLPASL SNSNVHPLVI AAHPQEPNMF AVGLSDGGVH IFEPLESEGK
1101: WGVAPPAENG SASGAPTAPS VGASASDQPQ R
Arabidopsis Description
TPLProtein TOPLESS [Source:UniProtKB/Swiss-Prot;Acc:Q94AI7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.