Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P11600_001 | Banana | cytosol | 85.9 | 86.2 |
| GSMUA_Achr4P12340_001 | Banana | cytosol | 85.9 | 86.2 |
| GSMUA_Achr4P05650_001 | Banana | cytosol | 84.85 | 85.53 |
| Os08t0162100-01 | Rice | nucleus | 82.31 | 82.97 |
| KXG24503 | Sorghum | cytosol | 82.66 | 82.95 |
| TraesCS7B01G189300.1 | Wheat | cytosol | 82.31 | 82.6 |
| TraesCS7D01G293500.1 | Wheat | golgi | 82.22 | 82.51 |
| TraesCS7A01G296100.6 | Wheat | cytosol | 82.22 | 82.51 |
| HORVU7Hr1G066930.5 | Barley | cytosol | 82.14 | 82.43 |
| GSMUA_Achr1P15450_001 | Banana | cytosol | 59.28 | 82.36 |
| GSMUA_Achr4P04560_001 | Banana | cytosol | 83.89 | 82.02 |
| Zm00001d024523_P003 | Maize | cytosol | 82.22 | 81.44 |
| VIT_16s0039g02410.t01 | Wine grape | cytosol | 79.16 | 79.65 |
| Solyc08g076030.2.1 | Tomato | nucleus | 75.92 | 76.39 |
| GSMUA_Achr1P15460_001 | Banana | endoplasmic reticulum, extracellular | 25.74 | 74.06 |
| GSMUA_Achr4P09920_001 | Banana | cytosol | 66.72 | 66.26 |
| GSMUA_Achr6P36440_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 65.76 | 65.08 |
| GSMUA_AchrUn_... | Banana | cytosol | 62.35 | 62.29 |
| GSMUA_Achr11P... | Banana | cytosol | 61.82 | 62.2 |
| GSMUA_Achr6P22950_001 | Banana | plasma membrane | 66.02 | 60.9 |
| GSMUA_Achr2P00320_001 | Banana | cytosol | 62.0 | 59.35 |
Protein Annotations
| MapMan:11.2.2.2 | MapMan:15.5.53.1 | Gene3D:2.130.10.10 | InterPro:CTLH_C | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr1G10830_001 | EnsemblPlants:GSMUA_Achr1P10830_001 | EnsemblPlants:GSMUA_Achr1T10830_001 | InterPro:IPR001680 | InterPro:IPR006594 |
| InterPro:IPR006595 | InterPro:IPR015943 | InterPro:IPR017986 | InterPro:LisH | UniProt:M0RYU2 | PFAM:PF00400 |
| ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 | PFscan:PS50896 | PFscan:PS50897 | PANTHER:PTHR44083 |
| PANTHER:PTHR44083:SF5 | InterPro:Quino_amine_DH_bsu | SMART:SM00320 | SMART:SM00667 | SMART:SM00668 | SUPFAM:SSF50969 |
| SUPFAM:SSF50978 | SUPFAM:SSF63829 | InterPro:Topless_fam | UniParc:UPI00029640AC | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat |
| InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg | : | : |
Description
Topless-related protein 1 [Source:GMGC_GENE;Acc:GSMUA_Achr1G10830_001]
Coordinates
chr1:-:8300596..8310455
Molecular Weight (calculated)
125564.0 Da
IEP (calculated)
7.271
GRAVY (calculated)
-0.260
Length
1142 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSSLSRELVF LILQFLDEEK FKDAVHKLEQ ESGFYFNMKH FEDLIQAGEW DEVERYLGGF TKVEDNRYSM KIFFEIRKQK YLEALDRHDR AKAVEILVKD
0101: LKVFASFNEE LFKEITVLLT LENFRQNEQL SKYGDTKSAR SIMLMELKKL IEANPLFRDK LTFPPFKASR LRTLINQSLN WQHQLCKNPR SNPDIKTLFI
0201: DHACAASANG ARAPPPTNGP LVGHIPKTGA FPPMGSHGPF QPIVSPPPSA IAGWMTNASP SLPHAAVAHG PPGLVQPPNA VAFLNHPRLP TSSPGIDYHT
0301: AESEHLMKRI RIGQADEVSF SGATYSRNVY SQDDIPKTVV RTLNQGSNVM SLDFHPMHHT ILLVGTNVGD TGIWEVGSRE RVAHKTFKVW DIGTCSLSLQ
0401: AALMKDAIIS VNRCLWSPDG SILGVAFSKH LVQTYTFSLN GELRQQSEID AHVGGVNDIA FSHPYKSLSI ITCGDDKTIK VWDVATRQRQ YTFEGHETPV
0501: YSVCPHYKES IQFIFSTAID GKIKAWLYDC LGSRVDYDAP GRWCTTMAYS ADGTRLFSCG TSKDGDSHLV EWNETEGAIK RTYSGFRKHS LGVVQFDTTR
0601: NRLLAAGDEF MIKFWDMDNT NILTTSDADG GLPASPRLRF NREGSLLAVT TSDNGIKILA NADGQRLVRM LESRAFEGSR GPFQLTNANV KAPVVSSLGA
0701: VSNVSSPVAA TPERPDRVLP AVSMTSLAVM DSNRAADVKP RISEDTEKIK SWKLADVVDS AHIKALHLPD STSTKSKVMR LLYTNSGLSV LALGSNAVHK
0801: LWKWTRNDRN PSGKSTASVA PQLWQPSNSI FMTNETSDNN PEEASACIAL SKNDSYVMSA SGGKVSLFNM MTFKVMTTFM PPPPAATFLA FHPQDNNIIA
0901: IGMEDSTIQI YNVRVDEVKT KLKGHQKKIT GLAFSQSLNV LVSSGADAQL CVWSIDGWEK KKSRFIQVPA GHASPLVGDT KVQFHNDQAH LLVVHQSQIT
1001: IYDSKLECLC SWSPRDALPA PISSAIYSCD GVLVYSAFCD GAIGVFEADS LRLRCRIAPS AYISPPVSSP PGAAYPMVIA AHPSEPNQIA LGMSDGAVHV
1101: VEPPDADPNW GSAPPQDNNG ALPTISPNPA LNSNQVSEPP SR
0101: LKVFASFNEE LFKEITVLLT LENFRQNEQL SKYGDTKSAR SIMLMELKKL IEANPLFRDK LTFPPFKASR LRTLINQSLN WQHQLCKNPR SNPDIKTLFI
0201: DHACAASANG ARAPPPTNGP LVGHIPKTGA FPPMGSHGPF QPIVSPPPSA IAGWMTNASP SLPHAAVAHG PPGLVQPPNA VAFLNHPRLP TSSPGIDYHT
0301: AESEHLMKRI RIGQADEVSF SGATYSRNVY SQDDIPKTVV RTLNQGSNVM SLDFHPMHHT ILLVGTNVGD TGIWEVGSRE RVAHKTFKVW DIGTCSLSLQ
0401: AALMKDAIIS VNRCLWSPDG SILGVAFSKH LVQTYTFSLN GELRQQSEID AHVGGVNDIA FSHPYKSLSI ITCGDDKTIK VWDVATRQRQ YTFEGHETPV
0501: YSVCPHYKES IQFIFSTAID GKIKAWLYDC LGSRVDYDAP GRWCTTMAYS ADGTRLFSCG TSKDGDSHLV EWNETEGAIK RTYSGFRKHS LGVVQFDTTR
0601: NRLLAAGDEF MIKFWDMDNT NILTTSDADG GLPASPRLRF NREGSLLAVT TSDNGIKILA NADGQRLVRM LESRAFEGSR GPFQLTNANV KAPVVSSLGA
0701: VSNVSSPVAA TPERPDRVLP AVSMTSLAVM DSNRAADVKP RISEDTEKIK SWKLADVVDS AHIKALHLPD STSTKSKVMR LLYTNSGLSV LALGSNAVHK
0801: LWKWTRNDRN PSGKSTASVA PQLWQPSNSI FMTNETSDNN PEEASACIAL SKNDSYVMSA SGGKVSLFNM MTFKVMTTFM PPPPAATFLA FHPQDNNIIA
0901: IGMEDSTIQI YNVRVDEVKT KLKGHQKKIT GLAFSQSLNV LVSSGADAQL CVWSIDGWEK KKSRFIQVPA GHASPLVGDT KVQFHNDQAH LLVVHQSQIT
1001: IYDSKLECLC SWSPRDALPA PISSAIYSCD GVLVYSAFCD GAIGVFEADS LRLRCRIAPS AYISPPVSSP PGAAYPMVIA AHPSEPNQIA LGMSDGAVHV
1101: VEPPDADPNW GSAPPQDNNG ALPTISPNPA LNSNQVSEPP SR
0001: MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMKY FEDEVHNGNW DEVEKYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDKHDR PKAVDILVKD
0101: LKVFSTFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR AIMLVELKKL IEANPLFRDK LQFPTLRNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCGPPNGA RAPSPVNNPL LGGIPKAGGF PPLGAHGPFQ PTASPVPTPL AGWMSSPSSV PHPAVSAGAI ALGGPSIPAA LKHPRTPPTN ASLDYPSADS
0301: EHVSKRTRPM GISDEVNLGV NMLPMSFSGQ AHGHSPAFKA PDDLPKTVAR TLSQGSSPMS MDFHPIKQTL LLVGTNVGDI GLWEVGSRER LVQKTFKVWD
0401: LSKCSMPLQA ALVKEPVVSV NRVIWSPDGS LFGVAYSRHI VQLYSYHGGE DMRQHLEIDA HVGGVNDISF STPNKQLCVI TCGDDKTIKV WDAATGVKRH
0501: TFEGHEAPVY SVCPHYKENI QFIFSTALDG KIKAWLYDNM GSRVDYDAPG RWCTTMAYSA DGTRLFSCGT SKDGESFIVE WNESEGAVKR TYQGFHKRSL
0601: GVVQFDTTKN RYLAAGDDFS IKFWDMDAVQ LLTAIDGDGG LQASPRIRFN KEGSLLAVSG NENVIKIMAN SDGLRLLHTF ENISSESSKP AINSIAAAAA
0701: AAATSAGHAD RSANVVSIQG MNGDSRNMVD VKPVITEESN DKSKIWKLTE VSEPSQCRSL RLPENLRVAK ISRLIFTNSG NAILALASNA IHLLWKWQRN
0801: ERNATGKATA SLPPQQWQPA SGILMTNDVA ETNPEEAVPC FALSKNDSYV MSASGGKISL FNMMTFKTMA TFMPPPPAAT FLAFHPQDNN IIAIGMDDST
0901: IQIYNVRVDE VKSKLKGHSK RITGLAFSNV LNVLVSSGAD AQLCVWNTDG WEKQRSKVLP LPQGRPNSAP SDTRVQFHQD QAHFLVVHET QLAIYETTKL
1001: ECMKQWAVRE SLAPITHATF SCDSQLVYAS FMDATVCVFS SANLRLRCRV NPSAYLPASL SNSNVHPLVI AAHPQEPNMF AVGLSDGGVH IFEPLESEGK
1101: WGVAPPAENG SASGAPTAPS VGASASDQPQ R
0101: LKVFSTFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR AIMLVELKKL IEANPLFRDK LQFPTLRNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCGPPNGA RAPSPVNNPL LGGIPKAGGF PPLGAHGPFQ PTASPVPTPL AGWMSSPSSV PHPAVSAGAI ALGGPSIPAA LKHPRTPPTN ASLDYPSADS
0301: EHVSKRTRPM GISDEVNLGV NMLPMSFSGQ AHGHSPAFKA PDDLPKTVAR TLSQGSSPMS MDFHPIKQTL LLVGTNVGDI GLWEVGSRER LVQKTFKVWD
0401: LSKCSMPLQA ALVKEPVVSV NRVIWSPDGS LFGVAYSRHI VQLYSYHGGE DMRQHLEIDA HVGGVNDISF STPNKQLCVI TCGDDKTIKV WDAATGVKRH
0501: TFEGHEAPVY SVCPHYKENI QFIFSTALDG KIKAWLYDNM GSRVDYDAPG RWCTTMAYSA DGTRLFSCGT SKDGESFIVE WNESEGAVKR TYQGFHKRSL
0601: GVVQFDTTKN RYLAAGDDFS IKFWDMDAVQ LLTAIDGDGG LQASPRIRFN KEGSLLAVSG NENVIKIMAN SDGLRLLHTF ENISSESSKP AINSIAAAAA
0701: AAATSAGHAD RSANVVSIQG MNGDSRNMVD VKPVITEESN DKSKIWKLTE VSEPSQCRSL RLPENLRVAK ISRLIFTNSG NAILALASNA IHLLWKWQRN
0801: ERNATGKATA SLPPQQWQPA SGILMTNDVA ETNPEEAVPC FALSKNDSYV MSASGGKISL FNMMTFKTMA TFMPPPPAAT FLAFHPQDNN IIAIGMDDST
0901: IQIYNVRVDE VKSKLKGHSK RITGLAFSNV LNVLVSSGAD AQLCVWNTDG WEKQRSKVLP LPQGRPNSAP SDTRVQFHQD QAHFLVVHET QLAIYETTKL
1001: ECMKQWAVRE SLAPITHATF SCDSQLVYAS FMDATVCVFS SANLRLRCRV NPSAYLPASL SNSNVHPLVI AAHPQEPNMF AVGLSDGGVH IFEPLESEGK
1101: WGVAPPAENG SASGAPTAPS VGASASDQPQ R
Arabidopsis Description
TPLProtein TOPLESS [Source:UniProtKB/Swiss-Prot;Acc:Q94AI7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.