Factsheet for VIT_12s0059g00760.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P13890_001	Banana	cytosol	62.53	80.44
VIT_10s0116g01650.t01	Wine grape	plastid	74.95	76.09
Solyc02g080640.2.1	Tomato	plastid	73.23	74.19
PGSC0003DMT400013022	Potato	plastid	72.38	74.12
PGSC0003DMT400051168	Potato	plastid	72.81	74.07
Solyc02g032860.2.1	Tomato	plastid	72.16	73.9
PGSC0003DMT400042488	Potato	plastid	72.59	73.7
Solyc03g031620.2.1	Tomato	plastid	71.73	73.46
Zm00001d021596_P001	Maize	plastid	66.81	67.68
Zm00001d006467_P002	Maize	plastid	65.52	67.11
TraesCS2D01G231100.1	Wheat	plastid	66.17	67.03
HORVU0Hr1G003890.1	Barley	plastid	65.52	66.81
TraesCS2A01G225200.1	Wheat	plastid	65.95	66.52
TraesCS2B01G275100.1	Wheat	plastid	65.95	66.52
EER99437	Sorghum	plastid	65.31	66.3
VIT_00s1490g00010.t01	Wine grape	plastid	29.12	65.07
Os07t0509800-01	Rice	endoplasmic reticulum	64.45	63.1

Protein Annotations

KEGG:00920+1.8.4.8	KEGG:00920+1.8.4.9	EntrezGene:100233045	wikigene:100233045	MapMan:25.2.1.3	Gene3D:3.40.30.10
Gene3D:3.40.50.620	ProteinID:ABY86365	ProteinID:ABY86365.1	InterPro:APS_reductase	ProteinID:CBI28810	ProteinID:CBI28810.3
UniProt:D7TE87	EMBL:EU275236	EMBL:FN595765	GO:GO:0003674	GO:GO:0003824	GO:GO:0004604
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016671	GO:GO:0019344	GO:GO:0019419	GO:GO:0019725
GO:GO:0045454	GO:GO:0055114	InterPro:IPR013766	InterPro:IPR014729	EntrezGene:LOC100233045	wikigene:LOC100233045
InterPro:PAPS_reduct	PFAM:PF00085	PFAM:PF01507	PFscan:PS51352	PANTHER:PTHR23293	PANTHER:PTHR23293:SF13
InterPro:Rossmann-like_a/b/a_fold	SUPFAM:SSF52402	SUPFAM:SSF52833	TIGR:TC57244	TIGRFAMs:TIGR00424	TIGRFAMs:TIGR02055
InterPro:Thioredoxin-indep_APS_Rdtase	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI0001BE342B	ArrayExpress:VIT_12s0059g00760	EnsemblPlantsGene:VIT_12s0059g00760
EnsemblPlants:VIT_12s0059g00760.t01	RefSeq:XP_002269739	RefSeq:XP_002269739.2	SEG:seg	:	:

Description

No Description!

Coordinates

chr12:+:5568642..5571313

Molecular Weight (calculated)

51480.1 Da

IEP (calculated)

6.901

GRAVY (calculated)

-0.318

Length

467 amino acids

Sequence
(BLAST)

001: MALAASSSSS AILGSVGSHD LNAAKISSFQ RLNQPVILSA SSNVIHGQSW MKPISADPKR SHAMIPFAAT VAAPEVLGKG ESEVVEDYDK LAKDLESASP
101: LEIMDKALQN FGNDIAIAFS GAEDVVLIEY ARLTGRPFRV FSLDTGRLNP ETYAFFDTVE KHYGIHIEYV FPDSVEVQAL VRNKGLFSFY EDGHQECCRI
201: RKVRPLRKAL KGLRAWITGQ RKDQSPGTRA EIPVVQVDPT FEGMDSGVGS LVKWNPVANV DSMDIWNFLR AMNVPVNSLH SQGYVSIGCE PCTRPVLPGQ
301: HEREGRWWWE DSKAKECGLH KGNIKQEQVP ELNGNGNGAA HKNGNAAVTD IFNSQNVVSL SRTGIGNLTK LENRADPWLV VLYAPWCRFC QAMEGSYDEL
401: AEKLAGSGIK VGKFRADGEQ KKFAQQELQL GSFPTILFFP KHSPNPIKYP SEKRDVDSLT AFVNALQ

Best Arabidopsis Sequence Match ( AT4G21990.1 )
(BLAST)

001: MALAINVSSS SSSAISSSSF PSSDLKVTKI GSLRLLNRTN VSAASLSLSG KRSSVKALNV QSITKESIVA SEVTEKLDVV EVEDFEELAK RLENASPLEI
101: MDKALEKFGN DIAIAFSGAE DVALIEYAHL TGRPYRVFSL DTGRLNPETY RLFDTVEKHY GIRIEYMFPD AVEVQALVRN KGLFSFYEDG HQECCRIRKV
201: RPLRRALKGL RAWITGQRKD QSPGTRSEIP VVQVDPVFEG LDGGVGSLVK WNPVANVEGN DVWNFLRTMD VPVNTLHAAG YVSIGCEPCT RAVLPGQHER
301: EGRWWWEDAK AKECGLHKGN IKENTNGNAT ANVNGTASVA DIFNSENVVN LSRQGIENLM KLENRKEAWI VVLYAPWCPF CQAMEASFDE LADKLGGSGV
401: KVAKFRADGD QKDFAKKELQ LGSFPTILVF PKNSSRPIKY PSEKRDVDSL TSFLNLVR

Arabidopsis Description

APR35'-adenylylsulfate reductase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P92980]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.