Factsheet for PGSC0003DMT400051168

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400017291
PGSC0003DMT400041923
PGSC0003DMT400059456
PGSC0003DMT400063083
PGSC0003DMT400077583
PGSC0003DMT400077585
PGSC0003DMT400077587
PGSC0003DMT400082107
PGSC0003DMT400090844
PGSC0003DMT400092399

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G62180.1	PGSC0003DMT400017291	AT1G05410.1	21798944
AT1G62180.1	PGSC0003DMT400041923	AT1G05410.1	21798944
AT1G62180.1	PGSC0003DMT400059456	AT1G05410.1	21798944
AT1G62180.1	PGSC0003DMT400077583	AT1G05410.1	21798944
AT1G62180.1	PGSC0003DMT400077585	AT1G05410.1	21798944
AT1G62180.1	PGSC0003DMT400077587	AT1G05410.1	21798944
AT1G62180.1	PGSC0003DMT400082107	AT1G05410.1	21798944
AT1G62180.1	PGSC0003DMT400090844	AT1G05410.1	21798944
AT1G62180.1	PGSC0003DMT400092399	AT1G05410.1	21798944
AT4G21990.1	PGSC0003DMT400063083	AT5G61010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g032860.2.1	Tomato	plastid	92.59	93.2
PGSC0003DMT400042488	Potato	plastid	85.19	85.0
GSMUA_Achr2P13890_001	Banana	cytosol	64.27	81.27
PGSC0003DMT400013022	Potato	plastid	80.39	80.92
Bra018501.1-P	Field mustard	cytosol	18.74	76.79
KRH51108	Soybean	plastid	77.12	75.97
KRH36471	Soybean	plastid	77.78	75.96
CDY16659	Canola	plastid	75.6	75.93
Bra029505.1-P	Field mustard	plastid	74.95	75.27
AT1G62180.1	Thale cress	plastid	74.29	75.11
KRH11444	Soybean	plastid	76.91	74.79
CDX94560	Canola	plastid	73.86	73.7
AT4G21990.1	Thale cress	plastid	73.2	73.36
VIT_12s0059g00760.t01	Wine grape	plastid	74.07	72.81
AT4G04610.1	Thale cress	plastid	73.42	72.47
Bra013579.1-P	Field mustard	plastid	73.86	72.44
CDX79117	Canola	plastid	73.42	71.7
CDX82892	Canola	plastid	72.98	71.28
CDX98723	Canola	plastid	72.33	70.94
CDX94072	Canola	plastid	71.68	70.91
Bra019406.1-P	Field mustard	plastid	71.9	70.51
CDY07244	Canola	plastid	73.86	70.48
CDY24876	Canola	plastid	73.64	70.12
Zm00001d006467_P002	Maize	plastid	69.28	69.74
Bra034466.1-P	Field mustard	plastid	72.77	69.73
CDY33547	Canola	mitochondrion	25.71	69.01
Zm00001d021596_P001	Maize	plastid	69.06	68.76
HORVU0Hr1G003890.1	Barley	plastid	68.19	68.34
EER99437	Sorghum	plastid	68.19	68.04
TraesCS2B01G275100.1	Wheat	plastid	68.63	68.03
TraesCS2D01G231100.1	Wheat	plastid	67.97	67.68
TraesCS2A01G225200.1	Wheat	plastid	68.19	67.6
Os07t0509800-01	Rice	endoplasmic reticulum	68.41	65.83
CDX97317	Canola	cytosol, peroxisome, plastid	21.13	56.4
Bra018502.1-P	Field mustard	cytosol, peroxisome, plastid	21.13	56.4

Protein Annotations

KEGG:00920+1.8.4.9	EntrezGene:102579112	MapMan:25.2.1.3	Gene3D:3.40.30.10	Gene3D:3.40.50.620	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016671	GO:GO:0019419	GO:GO:0019725	GO:GO:0045454	GO:GO:0055114	InterPro:IPR013766
InterPro:IPR014729	UniProt:M1BRD7	InterPro:PAPS_reduct	PFAM:PF00085	PFAM:PF01507	EnsemblPlantsGene:PGSC0003DMG400019872
PGSC:PGSC0003DMG400019872	EnsemblPlants:PGSC0003DMT400051168	PFscan:PS51352	PANTHER:PTHR23293	PANTHER:PTHR23293:SF13	InterPro:Rossmann-like_a/b/a_fold
SUPFAM:SSF52402	SUPFAM:SSF52833	TIGRFAMs:TIGR00424	InterPro:Thioredoxin-indep_APS_Rdtase	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain
UniParc:UPI0002968569	RefSeq:XP_006350478.1	:	:	:	:

Description

Adenylyl-sulfate reductase [Source:PGSC_GENE;Acc:PGSC0003DMG400019872]

Coordinates

chr2:+:17183104..17185714

Molecular Weight (calculated)

51213.8 Da

IEP (calculated)

6.037

GRAVY (calculated)

-0.365

Length

459 amino acids

Sequence
(BLAST)

001: MALAFTSSTA IHGSLSSSSH QQPIVSQLGN IQLLDQPNKF LNFSQRRCAV KPLYAEPKRN ESIVPSAATF VAPEVTEKVI DAEDFEKLAK DLENASPLEI
101: MDNALEKFGD DIAIAFSGAE DVALIEYAHL TGRPFRVFSL DTGRLNPETY QLFDAVEKHY GIHIEYMFPD SVEVQALVRT KGLFSFYEDG HQECCRVRKV
201: RPLRRALKGL RAWITGQRKD QSPGTRSEVP VVQVDPSFEG LDGGSGSLVK WNPVANVEGK DIWNFLRAMN VPVNSLHLKG YVSIGCEPCT RPVLPGQHER
301: EGRWWWEDAK AKECGLHKGN IKDESVNGNG NNATQANDTV ADIFDTKDIV TLSRPGVENL LKLEDRREPW LVVLYAPWCQ FCQAMEGSYV ELAEKLGGSG
401: VKVGKFRADG EQKTFAQQEL QLGSFPTILF FPKHASQPIK YPSEKRDVDS LLAFVNALR

Best Arabidopsis Sequence Match ( AT4G21990.1 )
(BLAST)

001: MALAINVSSS SSSAISSSSF PSSDLKVTKI GSLRLLNRTN VSAASLSLSG KRSSVKALNV QSITKESIVA SEVTEKLDVV EVEDFEELAK RLENASPLEI
101: MDKALEKFGN DIAIAFSGAE DVALIEYAHL TGRPYRVFSL DTGRLNPETY RLFDTVEKHY GIRIEYMFPD AVEVQALVRN KGLFSFYEDG HQECCRIRKV
201: RPLRRALKGL RAWITGQRKD QSPGTRSEIP VVQVDPVFEG LDGGVGSLVK WNPVANVEGN DVWNFLRTMD VPVNTLHAAG YVSIGCEPCT RAVLPGQHER
301: EGRWWWEDAK AKECGLHKGN IKENTNGNAT ANVNGTASVA DIFNSENVVN LSRQGIENLM KLENRKEAWI VVLYAPWCPF CQAMEASFDE LADKLGGSGV
401: KVAKFRADGD QKDFAKKELQ LGSFPTILVF PKNSSRPIKY PSEKRDVDSL TSFLNLVR

Arabidopsis Description

APR35'-adenylylsulfate reductase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P92980]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.