Factsheet for GSMUA_Achr2P13890_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr4P23470_001
GSMUA_Achr7P00520_001
GSMUA_Achr7P27170_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G62180.1	GSMUA_Achr7P27170_001	AT1G05410.1	21798944
AT4G21990.1	GSMUA_Achr4P23470_001	AT5G61010.1	21798944
AT4G21990.1	GSMUA_Achr7P00520_001	AT5G61010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra018501.1-P	Field mustard	cytosol	20.11	65.18
PGSC0003DMT400051168	Potato	plastid	81.27	64.27
Solyc02g032860.2.1	Tomato	plastid	80.44	64.04
PGSC0003DMT400013022	Potato	plastid	80.17	63.82
KRH51108	Soybean	plastid	81.82	63.73
Solyc03g031620.2.1	Tomato	plastid	79.61	63.38
Solyc02g080640.2.1	Tomato	plastid	80.44	63.34
PGSC0003DMT400042488	Potato	plastid	80.17	63.26
TraesCS2B01G275100.1	Wheat	plastid	80.44	63.07
TraesCS2A01G225200.1	Wheat	plastid	80.44	63.07
TraesCS2D01G231100.1	Wheat	plastid	79.89	62.91
HORVU0Hr1G003890.1	Barley	plastid	79.34	62.88
EER99437	Sorghum	plastid	79.61	62.83
KRH36471	Soybean	plastid	80.99	62.55
VIT_12s0059g00760.t01	Wine grape	plastid	80.44	62.53
Zm00001d006467_P002	Maize	plastid	78.51	62.5
Zm00001d021596_P001	Maize	plastid	79.34	62.47
KRH11444	Soybean	plastid	80.72	62.08
AT4G21990.1	Thale cress	plastid	78.24	62.01
CDY16659	Canola	plastid	76.58	60.83
Bra029505.1-P	Field mustard	plastid	76.31	60.61
AT1G62180.1	Thale cress	plastid	75.76	60.57
Bra013579.1-P	Field mustard	plastid	77.96	60.47
CDY33547	Canola	mitochondrion	28.37	60.23
CDX79117	Canola	plastid	77.96	60.21
CDX82892	Canola	plastid	77.41	59.79
AT4G04610.1	Thale cress	plastid	76.58	59.78
CDX94072	Canola	plastid	76.31	59.7
CDX94560	Canola	plastid	75.21	59.35
Bra019406.1-P	Field mustard	plastid	76.31	59.19
CDX98723	Canola	plastid	76.03	58.97
Os07t0509800-01	Rice	endoplasmic reticulum	77.41	58.91
Bra034466.1-P	Field mustard	plastid	77.14	58.46
CDY24876	Canola	plastid	77.14	58.09
CDY07244	Canola	plastid	76.58	57.8
CDX97317	Canola	cytosol, peroxisome, plastid	25.62	54.07
Bra018502.1-P	Field mustard	cytosol, peroxisome, plastid	25.62	54.07

Protein Annotations

KEGG:00920+1.8.4.8	KEGG:00920+1.8.4.9	MapMan:25.2.1.3	Gene3D:3.40.30.10	Gene3D:3.40.50.620	InterPro:APS_reductase
GO:GO:0003674	GO:GO:0003824	GO:GO:0004604	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016671	GO:GO:0019344	GO:GO:0019419
GO:GO:0019725	GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr2G13890_001	EnsemblPlants:GSMUA_Achr2P13890_001	EnsemblPlants:GSMUA_Achr2T13890_001
InterPro:IPR013766	InterPro:IPR014729	UniProt:M0S7T0	InterPro:PAPS_reduct	PFAM:PF00085	PFAM:PF01507
PFscan:PS51352	PANTHER:PTHR23293	PANTHER:PTHR23293:SF13	InterPro:Rossmann-like_a/b/a_fold	SUPFAM:SSF52402	SUPFAM:SSF52833
TIGRFAMs:TIGR00424	TIGRFAMs:TIGR02055	InterPro:Thioredoxin-indep_APS_Rdtase	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI000296910D
SEG:seg	:	:	:	:	:

Description

5'-adenylylsulfate reductase 3, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr2G13890_001]

Coordinates

chr2:-:15842988..15845610

Molecular Weight (calculated)

40813.8 Da

IEP (calculated)

7.433

GRAVY (calculated)

-0.360

Length

363 amino acids

Sequence
(BLAST)

001: MDRALDMFGN EIAIAFSGAE DVALIEYAKL TGRPFRVFSL DTGRLNPETY RFFDAVEKHY DIHIEYTFPD AGEVQALVRS KGLFSFYEDG HQECCRVRKV
101: RPLRRMLKGL RAWVTGQRKD QSPGTRANIP LVQVDPVFEG VDGLGSLIKW NPVADVEGKD IWNFLRTMNV PVNSLHSQGY VSIGCEPCTR PVLPGQHERE
201: GRWWWEDATA KECGLHKGNL KQDEAGKLGA NGNGVAAANG VDGTVDIFET QAIVNLSRPG IENLLKLEKR QEPWLVVLYA PWCRFCQGME TSYMELAEKL
301: VGSGIKVGKF RADGDQKPFA QKELQLGSFP TILFFPKNTS RPIKYPSEKR DVDSLLAFIN ALR

Best Arabidopsis Sequence Match ( AT4G21990.1 )
(BLAST)

001: MALAINVSSS SSSAISSSSF PSSDLKVTKI GSLRLLNRTN VSAASLSLSG KRSSVKALNV QSITKESIVA SEVTEKLDVV EVEDFEELAK RLENASPLEI
101: MDKALEKFGN DIAIAFSGAE DVALIEYAHL TGRPYRVFSL DTGRLNPETY RLFDTVEKHY GIRIEYMFPD AVEVQALVRN KGLFSFYEDG HQECCRIRKV
201: RPLRRALKGL RAWITGQRKD QSPGTRSEIP VVQVDPVFEG LDGGVGSLVK WNPVANVEGN DVWNFLRTMD VPVNTLHAAG YVSIGCEPCT RAVLPGQHER
301: EGRWWWEDAK AKECGLHKGN IKENTNGNAT ANVNGTASVA DIFNSENVVN LSRQGIENLM KLENRKEAWI VVLYAPWCPF CQAMEASFDE LADKLGGSGV
401: KVAKFRADGD QKDFAKKELQ LGSFPTILVF PKNSSRPIKY PSEKRDVDSL TSFLNLVR

Arabidopsis Description

APR35'-adenylylsulfate reductase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P92980]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.