Factsheet for TraesCS2B01G275100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G302600.1
TraesCS3B01G333800.1
TraesCS3D01G299200.1
TraesCS5A01G385300.3
TraesCS5B01G390300.3
TraesCS5D01G395300.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G62180.1	TraesCS5A01G385300.3	AT1G05410.1	21798944
AT1G62180.1	TraesCS5B01G390300.3	AT1G05410.1	21798944
AT1G62180.1	TraesCS5D01G395300.2	AT1G05410.1	21798944
AT4G21990.1	TraesCS3A01G302600.1	AT5G61010.1	21798944
AT4G21990.1	TraesCS3B01G333800.1	AT5G61010.1	21798944
AT4G21990.1	TraesCS3D01G299200.1	AT5G61010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G225200.1	Wheat	plastid	99.14	99.14
TraesCS2D01G231100.1	Wheat	plastid	96.54	96.96
HORVU0Hr1G003890.1	Barley	plastid	92.66	93.67
Zm00001d006467_P002	Maize	plastid	81.64	82.89
Zm00001d021596_P001	Maize	plastid	82.29	82.65
GSMUA_Achr2P13890_001	Banana	cytosol	63.07	80.44
EER99437	Sorghum	plastid	79.7	80.22
Os07t0509800-01	Rice	endoplasmic reticulum	76.67	74.42
Bra018501.1-P	Field mustard	cytosol	17.28	71.43
Solyc02g032860.2.1	Tomato	plastid	68.25	69.3
PGSC0003DMT400013022	Potato	plastid	68.03	69.08
Solyc03g031620.2.1	Tomato	plastid	67.82	68.86
KRH36471	Soybean	plastid	69.76	68.72
PGSC0003DMT400042488	Potato	plastid	68.25	68.7
PGSC0003DMT400051168	Potato	plastid	68.03	68.63
AT1G62180.1	Thale cress	plastid	67.17	68.5
CDY16659	Canola	plastid	67.6	68.49
Solyc02g080640.2.1	Tomato	plastid	67.6	67.9
Bra029505.1-P	Field mustard	plastid	66.74	67.61
KRH51108	Soybean	plastid	68.03	67.6
Bra019406.1-P	Field mustard	plastid	68.25	67.52
AT4G21990.1	Thale cress	plastid	66.74	67.47
KRH11444	Soybean	plastid	68.68	67.37
Bra013579.1-P	Field mustard	plastid	68.03	67.31
AT4G04610.1	Thale cress	plastid	67.39	67.1
CDX94560	Canola	plastid	66.31	66.74
CDX94072	Canola	plastid	66.52	66.38
CDX98723	Canola	plastid	66.74	66.03
VIT_12s0059g00760.t01	Wine grape	plastid	66.52	65.95
CDX82892	Canola	plastid	66.74	65.74
CDX79117	Canola	plastid	66.74	65.74
CDY24876	Canola	plastid	68.25	65.56
Bra034466.1-P	Field mustard	plastid	67.6	65.34
CDY07244	Canola	plastid	67.6	65.07
CDY33547	Canola	mitochondrion	23.11	62.57
CDX97317	Canola	cytosol, peroxisome, plastid	20.09	54.07
Bra018502.1-P	Field mustard	cytosol, peroxisome, plastid	20.09	54.07

Protein Annotations

KEGG:00920+1.8.4.9	MapMan:25.2.1.3	Gene3D:3.40.30.10	Gene3D:3.40.50.620	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016671	GO:GO:0019419
GO:GO:0019725	GO:GO:0045454	GO:GO:0055114	InterPro:IPR013766	InterPro:IPR014729	InterPro:PAPS_reduct
PFAM:PF00085	PFAM:PF01507	ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR23293	PANTHER:PTHR23293:SF13
InterPro:Rossmann-like_a/b/a_fold	SUPFAM:SSF52402	SUPFAM:SSF52833	TIGRFAMs:TIGR00424	InterPro:Thioredoxin-indep_APS_Rdtase	InterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain	EnsemblPlantsGene:TraesCS2B01G275100	EnsemblPlants:TraesCS2B01G275100.1	TIGR:cd01713	TIGR:cd02993
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2B:+:379785239..379788555

Molecular Weight (calculated)

50495.3 Da

IEP (calculated)

7.441

GRAVY (calculated)

-0.232

Length

463 amino acids

Sequence
(BLAST)

001: MASATASISS HSIALRDLKA TRIGAVRQQV AVVPAGLPAT APKGQRARAV RPLCAAEPAR KPVSASAASS PVAPVEEEAS AAAAVDYEAL AQELVGASPL
101: EIMDRALDMF GSEIAIAFSG AEDVALIEYA KLTGRPFRVF SLDTGRLNPE TYQLFDKVEK HYGIHIEYMF PEASEVQDLV RSKGLFSFYE DGHQECCRVR
201: KVRPLRRALK GLKAWITGQR KDQSPGTRAS IPVVQVDPSF EGLDGGAGSL IKWNPVANVD GKDIWTFLRT MDVPVNTLHA QGYVSIGCEP CTRPVLPGQH
301: EREGRWWWED ATAKECGLHK GNIDKEGQAP KVGVNGNGSA EASAPDIFQS QAIVNLTRPG IENLLRLENR AEPWLTVLYA PWCPYCQAME ASYVELAEKL
401: SGSGIKVAKF RADGEQKPFA QAELQLQSFP TILLFPGRTV KPIKYPSEKR DVQSLLAFVN SLR

Best Arabidopsis Sequence Match ( AT4G21990.1 )
(BLAST)

001: MALAINVSSS SSSAISSSSF PSSDLKVTKI GSLRLLNRTN VSAASLSLSG KRSSVKALNV QSITKESIVA SEVTEKLDVV EVEDFEELAK RLENASPLEI
101: MDKALEKFGN DIAIAFSGAE DVALIEYAHL TGRPYRVFSL DTGRLNPETY RLFDTVEKHY GIRIEYMFPD AVEVQALVRN KGLFSFYEDG HQECCRIRKV
201: RPLRRALKGL RAWITGQRKD QSPGTRSEIP VVQVDPVFEG LDGGVGSLVK WNPVANVEGN DVWNFLRTMD VPVNTLHAAG YVSIGCEPCT RAVLPGQHER
301: EGRWWWEDAK AKECGLHKGN IKENTNGNAT ANVNGTASVA DIFNSENVVN LSRQGIENLM KLENRKEAWI VVLYAPWCPF CQAMEASFDE LADKLGGSGV
401: KVAKFRADGD QKDFAKKELQ LGSFPTILVF PKNSSRPIKY PSEKRDVDSL TSFLNLVR

Arabidopsis Description

APR35'-adenylylsulfate reductase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P92980]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.