Factsheet for Bra034466.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra015422.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G62180.1	Bra015422.1-P	AT1G05410.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24876	Canola	plastid	98.33	97.72
AT1G62180.1	Thale cress	plastid	83.72	88.33
GSMUA_Achr2P13890_001	Banana	cytosol	58.46	77.14
Bra018501.1-P	Field mustard	cytosol	17.54	75.0
Bra029505.1-P	Field mustard	plastid	70.98	74.4
Bra019406.1-P	Field mustard	plastid	71.4	73.08
Bra013579.1-P	Field mustard	plastid	71.19	72.86
PGSC0003DMT400051168	Potato	plastid	69.73	72.77
VIT_10s0116g01650.t01	Wine grape	plastid	68.89	71.74
PGSC0003DMT400042488	Potato	plastid	68.68	71.52
Solyc02g032860.2.1	Tomato	plastid	68.06	71.49
Solyc02g080640.2.1	Tomato	plastid	68.68	71.37
PGSC0003DMT400013022	Potato	plastid	67.01	70.39
Solyc03g031620.2.1	Tomato	plastid	66.81	70.18
Zm00001d006467_P002	Maize	plastid	65.55	68.86
Zm00001d021596_P001	Maize	plastid	66.18	68.76
TraesCS2B01G275100.1	Wheat	plastid	65.34	67.6
HORVU0Hr1G003890.1	Barley	plastid	64.51	67.47
TraesCS2A01G225200.1	Wheat	plastid	65.14	67.39
TraesCS2D01G231100.1	Wheat	plastid	64.72	67.25
EER99437	Sorghum	plastid	64.51	67.17
VIT_00s1490g00010.t01	Wine grape	plastid	27.97	64.11
Os07t0509800-01	Rice	endoplasmic reticulum	63.26	63.52
Bra018502.1-P	Field mustard	cytosol, peroxisome, plastid	20.88	58.14

Protein Annotations

KEGG:00920+1.8.4.9	MapMan:25.2.1.3	Gene3D:3.40.30.10	Gene3D:3.40.50.620	EnsemblPlantsGene:Bra034466	EnsemblPlants:Bra034466.1
EnsemblPlants:Bra034466.1-P	ncoils:Coil	GO:GO:0000103	GO:GO:0003674	GO:GO:0003824	GO:GO:0004604
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152
GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009973	GO:GO:0009987	GO:GO:0016671
GO:GO:0019419	GO:GO:0019725	GO:GO:0045454	GO:GO:0055114	InterPro:IPR013766	InterPro:IPR014729
UniProt:M4F073	InterPro:PAPS_reduct	PFAM:PF00085	PFAM:PF01507	PFscan:PS51352	PANTHER:PTHR23293
PANTHER:PTHR23293:SF13	InterPro:Rossmann-like_a/b/a_fold	SUPFAM:SSF52402	SUPFAM:SSF52833	TIGRFAMs:TIGR00424	InterPro:Thioredoxin-indep_APS_Rdtase
InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI000253E554	SEG:seg	:	:

Description

AT1G62180 (E=3e-219) APR2, APSR, PRH43, PRH, ATAPR2 | APR2 (5'ADENYLYLPHOSPHOSULFATE REDUCTASE 2); adenylyl-sulfate reductase/ phosphoadenylyl-sulfate reductase (thioredoxin)

Coordinates

chrScaffold000096:-:53632..55924

Molecular Weight (calculated)

53568.9 Da

IEP (calculated)

7.170

GRAVY (calculated)

-0.348

Length

479 amino acids

Sequence
(BLAST)

001: MALAVTSSST AISGSSFSRS GPCSDRKALQ ICSFRLSDLS HVSQRRYSLK AESPPTRNDS LVTRASTLIT PGVEEKEEDV EDFEQLAKKL EEASPLEIMD
101: KALQRFGSNI AIAFSGAEDV ALIEYARLTG RPFRVFSLDT GRLNPETYRL FDAVEKQYGI RIEYTFPDAV EVQALVRNKG LFSFYEDGHQ ECCRVRKVRP
201: LRRALKGLKA WITGQRKDQS PGTRSEIPIV QVDPVFEGLD GGVGSLVKWN PLANVEGGDV WNFLRTMDVP VNALHAQGYV SIGCEPCTRP VLPGQHEREG
301: RWWWEDAKAK ECGLHKGNIK KEDDSTTADL APAIVHDIFE SSNVVALSRG GIENLLKLGN RKEPWLVVLY APWCPFCQAM EASYVELAEK LAVKGIKVAK
401: FRADGDQKEF AKQELQLGSF PTILLFPKSA PRAIKYPSEH RDVDSLMSFV NLLRSVRKHD DKELVLELMA TLTRGRESY

Best Arabidopsis Sequence Match ( AT1G62180.1 )
(BLAST)

001: MALAVTSSST AISGSSFSRS GASSESKALQ ICSIRLSDRT HLSQRRYSMK PLNAESHSRS ESWVTRASTL IAPEVEEKGG EVEDFEQLAK KLEDASPLEI
101: MDKALERFGD QIAIAFSGAE DVALIEYARL TGKPFRVFSL DTGRLNPETY RLFDAVEKQY GIRIEYMFPD AVEVQALVRN KGLFSFYEDG HQECCRVRKV
201: RPLRRALKGL KAWITGQRKD QSPGTRSEIP IVQVDPVFEG LDGGVGSLVK WNPLANVEGA DVWNFLRTMD VPVNALHAQG YVSIGCEPCT RPVLPGQHER
301: EGRWWWEDAK AKECGLHKGN IKEEDGAADS KPAAVQEIFE SNNVVALSKG GVENLLKLEN RKEAWLVVLY APWCPFCQAM EASYIELAEK LAGKGVKVAK
401: FRADGEQKEF AKQELQLGSF PTILLFPKRA PRAIKYPSEH RDVDSLMSFV NLLR

Arabidopsis Description

APR25'-adenylylsulfate reductase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P92981]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.