Factsheet for Bra019406.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra012987.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G21990.1	Bra012987.1-P	AT5G61010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX94072	Canola	plastid	93.38	94.18
CDX98723	Canola	plastid	94.02	94.02
Bra013579.1-P	Field mustard	plastid	91.24	91.24
AT4G21990.1	Thale cress	plastid	86.75	88.65
Bra029505.1-P	Field mustard	plastid	80.98	82.93
GSMUA_Achr2P13890_001	Banana	cytosol	59.19	76.31
Bra018501.1-P	Field mustard	cytosol	18.16	75.89
VIT_10s0116g01650.t01	Wine grape	plastid	70.94	72.17
Solyc02g080640.2.1	Tomato	plastid	70.94	72.02
PGSC0003DMT400051168	Potato	plastid	70.51	71.9
Solyc02g032860.2.1	Tomato	plastid	69.87	71.71
PGSC0003DMT400042488	Potato	plastid	70.3	71.52
Bra034466.1-P	Field mustard	plastid	73.08	71.4
Solyc03g031620.2.1	Tomato	plastid	68.59	70.39
PGSC0003DMT400013022	Potato	plastid	68.38	70.18
Zm00001d021596_P001	Maize	plastid	68.59	69.63
TraesCS2B01G275100.1	Wheat	plastid	67.52	68.25
TraesCS2A01G225200.1	Wheat	plastid	67.31	68.03
Zm00001d006467_P002	Maize	plastid	66.24	67.98
HORVU0Hr1G003890.1	Barley	plastid	66.24	67.69
TraesCS2D01G231100.1	Wheat	plastid	66.67	67.68
EER99437	Sorghum	plastid	66.45	67.61
Bra018502.1-P	Field mustard	cytosol, peroxisome, plastid	24.15	65.7
VIT_00s1490g00010.t01	Wine grape	plastid	29.06	65.07
Os07t0509800-01	Rice	endoplasmic reticulum	65.81	64.57

Protein Annotations

KEGG:00920+1.8.4.9	MapMan:25.2.1.3	Gene3D:3.40.30.10	Gene3D:3.40.50.620	EnsemblPlantsGene:Bra019406	EnsemblPlants:Bra019406.1
EnsemblPlants:Bra019406.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016671	GO:GO:0019419	GO:GO:0019725	GO:GO:0045454
GO:GO:0055114	InterPro:IPR013766	InterPro:IPR014729	UniProt:M4DSB3	InterPro:PAPS_reduct	PFAM:PF00085
PFAM:PF01507	PFscan:PS51352	PANTHER:PTHR23293	PANTHER:PTHR23293:SF13	InterPro:Rossmann-like_a/b/a_fold	SUPFAM:SSF52402
SUPFAM:SSF52833	TIGRFAMs:TIGR00424	InterPro:Thioredoxin-indep_APS_Rdtase	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI0002540D1F
SEG:seg	:	:	:	:	:

Description

AT4G04610 (E=2e-210) APR1, APR, PRH19, ATAPR1 | APR1 (APS REDUCTASE 1); adenylyl-sulfate reductase

Coordinates

chrA03:-:24358210..24359793

Molecular Weight (calculated)

51691.3 Da

IEP (calculated)

6.290

GRAVY (calculated)

-0.316

Length

468 amino acids

Sequence
(BLAST)

001: MALAINVSSS SSSISTSSFP SSDLKAPQIG SLRLSDRINV SSASLSLSGK RSSVKALNVQ SITKESMVPP QAASMVASEI REKVDVIEVE DFEELAKKLE
101: TASPLEIMDK ALENFGNDIA IAFSGAEDVA LIEYAHLTGR PYRVFSLDTG RLNPETYRLF DTVEKHYGIR IEYMFPDAVE VQALVRSKGL FSFYEDGHQE
201: CCRIRKVRPL RRALKGLRAW ITGQRKDQSP GTRSEIPVVQ VDPVFEGLDG GAGSLVKWNP VANVEGNDVW SFLRTMDVPV NTLHAAGYVS IGCEPCTRAV
301: LPGQHEREGR WWWEDAKAKE CGLHKGNIKE SSNGNNAAVN GNGTTSTVDD IFKSENVVSL SRQGIENLMK LENRKEAWIV VLYAPWCPFC QAMEASFDEL
401: ADKLRGGDGV KVAKFRADGD QKEFAKSELQ LGSFPTILVF PKNSSRPIKY PSEKRDVDSL TSFLNLVR

Best Arabidopsis Sequence Match ( AT4G21990.1 )
(BLAST)

001: MALAINVSSS SSSAISSSSF PSSDLKVTKI GSLRLLNRTN VSAASLSLSG KRSSVKALNV QSITKESIVA SEVTEKLDVV EVEDFEELAK RLENASPLEI
101: MDKALEKFGN DIAIAFSGAE DVALIEYAHL TGRPYRVFSL DTGRLNPETY RLFDTVEKHY GIRIEYMFPD AVEVQALVRN KGLFSFYEDG HQECCRIRKV
201: RPLRRALKGL RAWITGQRKD QSPGTRSEIP VVQVDPVFEG LDGGVGSLVK WNPVANVEGN DVWNFLRTMD VPVNTLHAAG YVSIGCEPCT RAVLPGQHER
301: EGRWWWEDAK AKECGLHKGN IKENTNGNAT ANVNGTASVA DIFNSENVVN LSRQGIENLM KLENRKEAWI VVLYAPWCPF CQAMEASFDE LADKLGGSGV
401: KVAKFRADGD QKDFAKKELQ LGSFPTILVF PKNSSRPIKY PSEKRDVDSL TSFLNLVR

Arabidopsis Description

APR35'-adenylylsulfate reductase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P92980]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.