Factsheet for PGSC0003DMT400013022

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400017291
PGSC0003DMT400041923
PGSC0003DMT400059456
PGSC0003DMT400063083
PGSC0003DMT400077583
PGSC0003DMT400077585
PGSC0003DMT400077587
PGSC0003DMT400082107
PGSC0003DMT400090844
PGSC0003DMT400092399

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G62180.1	PGSC0003DMT400017291	AT1G05410.1	21798944
AT1G62180.1	PGSC0003DMT400041923	AT1G05410.1	21798944
AT1G62180.1	PGSC0003DMT400059456	AT1G05410.1	21798944
AT1G62180.1	PGSC0003DMT400077583	AT1G05410.1	21798944
AT1G62180.1	PGSC0003DMT400077585	AT1G05410.1	21798944
AT1G62180.1	PGSC0003DMT400077587	AT1G05410.1	21798944
AT1G62180.1	PGSC0003DMT400082107	AT1G05410.1	21798944
AT1G62180.1	PGSC0003DMT400090844	AT1G05410.1	21798944
AT1G62180.1	PGSC0003DMT400092399	AT1G05410.1	21798944
AT4G21990.1	PGSC0003DMT400063083	AT5G61010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g031620.2.1	Tomato	plastid	96.05	96.05
PGSC0003DMT400042488	Potato	plastid	81.14	80.43
PGSC0003DMT400051168	Potato	plastid	80.92	80.39
GSMUA_Achr2P13890_001	Banana	cytosol	63.82	80.17
KRH36471	Soybean	plastid	76.32	74.04
KRH11444	Soybean	plastid	76.1	73.52
Bra018501.1-P	Field mustard	cytosol	17.98	73.21
VIT_12s0059g00760.t01	Wine grape	plastid	74.12	72.38
AT1G62180.1	Thale cress	plastid	71.71	72.03
AT4G21990.1	Thale cress	plastid	72.15	71.83
KRH51108	Soybean	plastid	72.59	71.03
Bra013579.1-P	Field mustard	plastid	72.81	70.94
CDY16659	Canola	plastid	70.83	70.68
Bra029505.1-P	Field mustard	plastid	70.61	70.46
CDX94072	Canola	plastid	71.27	70.04
CDX79117	Canola	plastid	72.15	70.0
AT4G04610.1	Thale cress	plastid	71.27	69.89
CDX82892	Canola	plastid	71.93	69.79
CDX98723	Canola	plastid	71.49	69.66
CDX94560	Canola	plastid	70.18	69.57
Zm00001d021596_P001	Maize	plastid	69.96	69.2
Zm00001d006467_P002	Maize	plastid	68.42	68.42
Bra019406.1-P	Field mustard	plastid	70.18	68.38
EER99437	Sorghum	plastid	68.86	68.26
HORVU0Hr1G003890.1	Barley	plastid	68.42	68.12
TraesCS2B01G275100.1	Wheat	plastid	69.08	68.03
TraesCS2D01G231100.1	Wheat	plastid	68.42	67.68
CDY07244	Canola	plastid	71.27	67.57
TraesCS2A01G225200.1	Wheat	plastid	68.42	67.39
Bra034466.1-P	Field mustard	plastid	70.39	67.01
CDY24876	Canola	plastid	70.83	67.01
CDY33547	Canola	mitochondrion	24.56	65.5
Os07t0509800-01	Rice	endoplasmic reticulum	67.76	64.78
CDX97317	Canola	cytosol, peroxisome, plastid	20.39	54.07
Bra018502.1-P	Field mustard	cytosol, peroxisome, plastid	20.39	54.07

Protein Annotations

KEGG:00920+1.8.4.9	EntrezGene:102587128	MapMan:25.2.1.3	Gene3D:3.40.30.10	Gene3D:3.40.50.620	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016671	GO:GO:0019419	GO:GO:0019725	GO:GO:0045454	GO:GO:0055114	InterPro:IPR013766
InterPro:IPR014729	UniProt:M1A263	InterPro:PAPS_reduct	PFAM:PF00085	PFAM:PF01507	EnsemblPlantsGene:PGSC0003DMG402005074
PGSC:PGSC0003DMG402005074	EnsemblPlants:PGSC0003DMT400013022	PFscan:PS51352	PANTHER:PTHR23293	PANTHER:PTHR23293:SF13	InterPro:Rossmann-like_a/b/a_fold
SUPFAM:SSF52402	SUPFAM:SSF52833	TIGRFAMs:TIGR00424	InterPro:Thioredoxin-indep_APS_Rdtase	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain
UniParc:UPI000294968C	RefSeq:XP_006343282.1	SEG:seg	:	:	:

Description

Adenylyl-sulfate reductase [Source:PGSC_GENE;Acc:PGSC0003DMG402005074]

Coordinates

chr3:-:2473202..2476884

Molecular Weight (calculated)

50737.5 Da

IEP (calculated)

7.237

GRAVY (calculated)

-0.320

Length

456 amino acids

Sequence
(BLAST)

001: MALAFTSSSV IHGSLSSSSS YEQQQPKVSQ MGITQPMDRS RIPLKAVNFT QRSLAMKPLV PLAATIVAPE VEEKAETDDY EKLAKELTNA SPLKIMDKAL
101: EKFGSEIAIA FSGAEDVALL EYARLTGRPF RVFSLDTGRL NPETYQLFDA VEKHYGIHIE YMFPDAVEVQ ALVRNKGLYS FYEDGHQECC RIRKVRPLRR
201: ALKGLRAWIT GQRKDQSPGT RSEIPIVQVD PSFEGLDGGV GSLVKWNPVA NVDGNDIWNF LRAMNVPVNS LHSQGYVSIG CEPCTRAVLP GQHEREGRWW
301: WEDSKAKECG LHKANIKDES MNGNGNGAVH ANGSAAVADI FDTNDIVSLS RPGIENLLKL ENRREPWIVV LYAPWCQFCQ AMEGSYVELA EKLASSGVKV
401: AKFRGDGEQK AFAQKELQLG SFPTILFFPR HTSQPIKYPS VKRDVDSLLA FVNALR

Best Arabidopsis Sequence Match ( AT4G21990.1 )
(BLAST)

001: MALAINVSSS SSSAISSSSF PSSDLKVTKI GSLRLLNRTN VSAASLSLSG KRSSVKALNV QSITKESIVA SEVTEKLDVV EVEDFEELAK RLENASPLEI
101: MDKALEKFGN DIAIAFSGAE DVALIEYAHL TGRPYRVFSL DTGRLNPETY RLFDTVEKHY GIRIEYMFPD AVEVQALVRN KGLFSFYEDG HQECCRIRKV
201: RPLRRALKGL RAWITGQRKD QSPGTRSEIP VVQVDPVFEG LDGGVGSLVK WNPVANVEGN DVWNFLRTMD VPVNTLHAAG YVSIGCEPCT RAVLPGQHER
301: EGRWWWEDAK AKECGLHKGN IKENTNGNAT ANVNGTASVA DIFNSENVVN LSRQGIENLM KLENRKEAWI VVLYAPWCPF CQAMEASFDE LADKLGGSGV
401: KVAKFRADGD QKDFAKKELQ LGSFPTILVF PKNSSRPIKY PSEKRDVDSL TSFLNLVR

Arabidopsis Description

APR35'-adenylylsulfate reductase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P92980]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.