CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG99083
KRH27646
KRH54704
KRH63230
KRH77849

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G62180.1	KRG99083	AT1G05410.1	21798944
AT1G62180.1	KRH27646	AT1G05410.1	21798944
AT1G62180.1	KRH77849	AT1G05410.1	21798944
AT4G21990.1	KRH54704	AT5G61010.1	21798944
AT4G21990.1	KRH63230	AT5G61010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P13890_001	Banana	cytosol	63.73	81.82
KRH36471	Soybean	plastid	79.83	79.15
VIT_10s0116g01650.t01	Wine grape	plastid	77.25	78.26
KRH11444	Soybean	plastid	78.76	77.75
PGSC0003DMT400051168	Potato	plastid	75.97	77.12
Solyc02g032860.2.1	Tomato	plastid	74.89	76.54
Solyc02g080640.2.1	Tomato	plastid	74.68	75.49
PGSC0003DMT400042488	Potato	plastid	74.46	75.43
AT4G21990.1	Thale cress	plastid	73.39	74.67
AT1G62180.1	Thale cress	plastid	72.32	74.23
AT4G04610.1	Thale cress	plastid	74.03	74.19
PGSC0003DMT400013022	Potato	plastid	71.03	72.59
Solyc03g031620.2.1	Tomato	plastid	70.82	72.37
Zm00001d021596_P001	Maize	plastid	68.67	69.41
Zm00001d006467_P002	Maize	plastid	67.38	68.86
VIT_00s1490g00010.t01	Wine grape	plastid	30.69	68.42
HORVU0Hr1G003890.1	Barley	plastid	67.17	68.34
EER99437	Sorghum	plastid	67.38	68.26
TraesCS2B01G275100.1	Wheat	plastid	67.6	68.03
TraesCS2A01G225200.1	Wheat	plastid	67.17	67.6
TraesCS2D01G231100.1	Wheat	plastid	66.52	67.25
Os07t0509800-01	Rice	endoplasmic reticulum	66.09	64.57
CDX97317	Canola	cytosol, peroxisome, plastid	21.46	58.14
Bra018502.1-P	Field mustard	cytosol, peroxisome, plastid	21.46	58.14

Protein Annotations

KEGG:00920+1.8.4.9	EntrezGene:100819536	MapMan:25.2.1.3	Gene3D:3.40.30.10	Gene3D:3.40.50.620	EMBL:ACUP02004727
EnsemblPlantsGene:GLYMA_07G261500	GO:GO:0003674	GO:GO:0003824	GO:GO:0004604	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016671
GO:GO:0019419	GO:GO:0019725	GO:GO:0045454	GO:GO:0055114	UniProt:I1KNE4	InterPro:IPR013766
InterPro:IPR014729	EnsemblPlants:KRH51108	ProteinID:KRH51108	ProteinID:KRH51108.1	InterPro:PAPS_reduct	PFAM:PF00085
PFAM:PF01507	ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR23293	PANTHER:PTHR23293:SF13	MetaCyc:PWY-6932
InterPro:Rossmann-like_a/b/a_fold	SUPFAM:SSF52402	SUPFAM:SSF52833	TIGRFAMs:TIGR00424	InterPro:Thioredoxin-indep_APS_Rdtase	InterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain	UniParc:UPI0002338F0E	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:43653430..43655936

Molecular Weight (calculated)

51787.6 Da

IEP (calculated)

6.936

GRAVY (calculated)

-0.397

Length

466 amino acids

Sequence
(BLAST)

001: MALAFTSSIS APTSTFPSSE PKLPQIGSIR ISERPIGGAV NFNLSQRRSL VKPVNAEPPR KDSIVPLAAT TIVASASETK EEDFEQIASD LDNASPLEIM
101: DRALDKFGND IAIAFSGAED VALIEYAKLT GRPFRVFSLD TGRLNPETYQ LFDAVEKHYG IRIEYMFPDA VEVQALVRSK GLFSFYEDGH QECCRVRKVR
201: PLRRALKGLR AWITGQRKDQ SPGTRSEIPV VQVDPVFEGM DGGIGSLVKW NPVANVKGHD IWNFLRTMNV PVNSLHAKGY VSIGCEPCTR PVLPGQHERE
301: GRWWWEDAKA KECGLHKGNV KQQKEEDVNG NGLSQSHANG DATTVPDIFN SPNVVNLSRT GIENLAKLED RKEPWLVVLY APWCPYCQAM EESYVDLADK
401: LAGSTGMKVG KFRADGEQKE FAKSELQLGS FPTILFFPKH SSRPTIKYPS EKRDVDSLMA FVNALR

Best Arabidopsis Sequence Match ( AT4G21990.1 )
(BLAST)

001: MALAINVSSS SSSAISSSSF PSSDLKVTKI GSLRLLNRTN VSAASLSLSG KRSSVKALNV QSITKESIVA SEVTEKLDVV EVEDFEELAK RLENASPLEI
101: MDKALEKFGN DIAIAFSGAE DVALIEYAHL TGRPYRVFSL DTGRLNPETY RLFDTVEKHY GIRIEYMFPD AVEVQALVRN KGLFSFYEDG HQECCRIRKV
201: RPLRRALKGL RAWITGQRKD QSPGTRSEIP VVQVDPVFEG LDGGVGSLVK WNPVANVEGN DVWNFLRTMD VPVNTLHAAG YVSIGCEPCT RAVLPGQHER
301: EGRWWWEDAK AKECGLHKGN IKENTNGNAT ANVNGTASVA DIFNSENVVN LSRQGIENLM KLENRKEAWI VVLYAPWCPF CQAMEASFDE LADKLGGSGV
401: KVAKFRADGD QKDFAKKELQ LGSFPTILVF PKNSSRPIKY PSEKRDVDSL TSFLNLVR

Arabidopsis Description

APR35'-adenylylsulfate reductase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P92980]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.