CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG99083
KRH27646
KRH54704
KRH63230
KRH77849

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G62180.1	KRG99083	AT1G05410.1	21798944
AT1G62180.1	KRH27646	AT1G05410.1	21798944
AT1G62180.1	KRH77849	AT1G05410.1	21798944
AT4G21990.1	KRH54704	AT5G61010.1	21798944
AT4G21990.1	KRH63230	AT5G61010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH36471	Soybean	plastid	94.07	94.47
GSMUA_Achr2P13890_001	Banana	cytosol	62.08	80.72
VIT_10s0116g01650.t01	Wine grape	plastid	77.54	79.57
PGSC0003DMT400042488	Potato	plastid	77.33	79.35
Solyc02g080640.2.1	Tomato	plastid	77.12	78.96
KRH51108	Soybean	plastid	77.75	78.76
Solyc02g032860.2.1	Tomato	plastid	75.21	77.85
AT1G62180.1	Thale cress	plastid	74.79	77.75
PGSC0003DMT400051168	Potato	plastid	74.79	76.91
AT4G21990.1	Thale cress	plastid	74.15	76.42
Solyc03g031620.2.1	Tomato	plastid	73.52	76.1
PGSC0003DMT400013022	Potato	plastid	73.52	76.1
AT4G04610.1	Thale cress	plastid	74.36	75.48
VIT_00s1490g00010.t01	Wine grape	plastid	31.99	72.25
Zm00001d021596_P001	Maize	plastid	68.22	69.85
Zm00001d006467_P002	Maize	plastid	66.95	69.3
HORVU0Hr1G003890.1	Barley	plastid	66.74	68.78
EER99437	Sorghum	plastid	66.95	68.7
TraesCS2B01G275100.1	Wheat	plastid	67.37	68.68
TraesCS2A01G225200.1	Wheat	plastid	67.16	68.47
TraesCS2D01G231100.1	Wheat	plastid	66.74	68.33
Os07t0509800-01	Rice	endoplasmic reticulum	65.04	64.36
CDX97317	Canola	cytosol, peroxisome, plastid	20.55	56.4
Bra018502.1-P	Field mustard	cytosol, peroxisome, plastid	20.55	56.4

Protein Annotations

KEGG:00920+1.8.4.9	EntrezGene:100799978	MapMan:25.2.1.3	Gene3D:3.40.30.10	Gene3D:3.40.50.620	EMBL:ACUP02009209
ncoils:Coil	EnsemblPlantsGene:GLYMA_15G108700	GO:GO:0003674	GO:GO:0003824	GO:GO:0004604	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016671	GO:GO:0019419	GO:GO:0019725	GO:GO:0045454	GO:GO:0055114	UniProt:I1MFI0
InterPro:IPR013766	InterPro:IPR014729	ProteinID:KRH11443.1	EnsemblPlants:KRH11444	ProteinID:KRH11444	ProteinID:KRH11444.1
InterPro:PAPS_reduct	PFAM:PF00085	PFAM:PF01507	PFscan:PS51352	PANTHER:PTHR23293	PANTHER:PTHR23293:SF13
MetaCyc:PWY-6932	InterPro:Rossmann-like_a/b/a_fold	SUPFAM:SSF52402	SUPFAM:SSF52833	TIGRFAMs:TIGR00424	InterPro:Thioredoxin-indep_APS_Rdtase
InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI00004AE4F5	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr15:+:8547484..8550958

Molecular Weight (calculated)

52238.8 Da

IEP (calculated)

7.238

GRAVY (calculated)

-0.368

Length

472 amino acids

Sequence
(BLAST)

001: MALAVSTTSS SSAAAAAAAS SSFFSRLGSS SDAKAPQIGS FRFPERPQVS SGVVNLTQRR SSVRPLNAEP QRNDSVVPLA ATIVAPEVEK EKEDFEQLAK
101: DLENSSPLEI MDKALEKFGN DIAIAFSGAE DVALIEYAHL TGRPYRVFSL DTGRLNPETY KFFDAVEKHY GIHIEYMFPD AVEVQALVRT KGLFSFYEDG
201: HQECCRVRKV RPLRRALKGL KAWITGQRKD QSPGTRSEIP IVQVDPVFEG LDGGIGSLVK WNPVANVNGL DIWNFLRTMN VPVNSLHSQG YVSIGCEPCT
301: RPVLPGQHER EGRWWWEDAK AKECGLHKGN LKQEDAAQLN GNGTSQGNGS ATVADIFISQ NVVSLSRSGI ENLAKLENRK EHWLVVLYAP WCRFCQAMEE
401: SYVDLAEKLA RSGVKVAKFR ADGEQKEYAK SELQLGSFPT ILLFPKHSSQ PIKYPSEKRD VDSLTAFVNA LR

Best Arabidopsis Sequence Match ( AT4G21990.1 )
(BLAST)

001: MALAINVSSS SSSAISSSSF PSSDLKVTKI GSLRLLNRTN VSAASLSLSG KRSSVKALNV QSITKESIVA SEVTEKLDVV EVEDFEELAK RLENASPLEI
101: MDKALEKFGN DIAIAFSGAE DVALIEYAHL TGRPYRVFSL DTGRLNPETY RLFDTVEKHY GIRIEYMFPD AVEVQALVRN KGLFSFYEDG HQECCRIRKV
201: RPLRRALKGL RAWITGQRKD QSPGTRSEIP VVQVDPVFEG LDGGVGSLVK WNPVANVEGN DVWNFLRTMD VPVNTLHAAG YVSIGCEPCT RAVLPGQHER
301: EGRWWWEDAK AKECGLHKGN IKENTNGNAT ANVNGTASVA DIFNSENVVN LSRQGIENLM KLENRKEAWI VVLYAPWCPF CQAMEASFDE LADKLGGSGV
401: KVAKFRADGD QKDFAKKELQ LGSFPTILVF PKNSSRPIKY PSEKRDVDSL TSFLNLVR

Arabidopsis Description

APR35'-adenylylsulfate reductase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P92980]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.