CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG99083
KRH27646
KRH54704
KRH63230
KRH77849

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G62180.1	KRG99083	AT1G05410.1	21798944
AT1G62180.1	KRH27646	AT1G05410.1	21798944
AT1G62180.1	KRH77849	AT1G05410.1	21798944
AT4G21990.1	KRH54704	AT5G61010.1	21798944
AT4G21990.1	KRH63230	AT5G61010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH11444	Soybean	plastid	94.47	94.07
GSMUA_Achr2P13890_001	Banana	cytosol	62.55	80.99
VIT_10s0116g01650.t01	Wine grape	plastid	78.3	80.0
KRH51108	Soybean	plastid	79.15	79.83
PGSC0003DMT400042488	Potato	plastid	77.87	79.57
Solyc02g080640.2.1	Tomato	plastid	77.66	79.18
Solyc02g032860.2.1	Tomato	plastid	75.96	78.29
PGSC0003DMT400051168	Potato	plastid	75.96	77.78
AT1G62180.1	Thale cress	plastid	74.68	77.31
AT4G21990.1	Thale cress	plastid	74.68	76.64
PGSC0003DMT400013022	Potato	plastid	74.04	76.32
Solyc03g031620.2.1	Tomato	plastid	73.83	76.1
AT4G04610.1	Thale cress	plastid	75.11	75.91
VIT_00s1490g00010.t01	Wine grape	plastid	32.34	72.73
Zm00001d021596_P001	Maize	plastid	69.36	70.72
Zm00001d006467_P002	Maize	plastid	68.09	70.18
HORVU0Hr1G003890.1	Barley	plastid	68.09	69.87
TraesCS2B01G275100.1	Wheat	plastid	68.72	69.76
EER99437	Sorghum	plastid	68.09	69.57
TraesCS2A01G225200.1	Wheat	plastid	68.51	69.55
TraesCS2D01G231100.1	Wheat	plastid	68.09	69.41
Os07t0509800-01	Rice	endoplasmic reticulum	66.17	65.2
CDX97317	Canola	cytosol, peroxisome, plastid	21.49	58.72
Bra018502.1-P	Field mustard	cytosol, peroxisome, plastid	21.49	58.72

Protein Annotations

KEGG:00920+1.8.4.9	MapMan:25.2.1.3	Gene3D:3.40.30.10	Gene3D:3.40.50.620	EntrezGene:547630	EMBL:ACUP02005375
EMBL:AF452450	ncoils:Coil	EnsemblPlantsGene:GLYMA_09G004400	GO:GO:0003674	GO:GO:0003824	GO:GO:0004604
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016671	GO:GO:0019419	GO:GO:0019725	GO:GO:0045454	GO:GO:0055114
InterPro:IPR013766	InterPro:IPR014729	EnsemblPlants:KRH36471	ProteinID:KRH36471	ProteinID:KRH36471.1	ProteinID:KRH36472.1
InterPro:PAPS_reduct	PFAM:PF00085	PFAM:PF01507	PFscan:PS51352	PANTHER:PTHR23293	PANTHER:PTHR23293:SF13
MetaCyc:PWY-6932	UniProt:Q8W1A1	InterPro:Rossmann-like_a/b/a_fold	SUPFAM:SSF52402	SUPFAM:SSF52833	TIGRFAMs:TIGR00424
InterPro:Thioredoxin-indep_APS_Rdtase	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI00000A1B0B	SEG:seg	:

Description

hypothetical protein

Coordinates

chr9:+:351120..354290

Molecular Weight (calculated)

51968.5 Da

IEP (calculated)

6.264

GRAVY (calculated)

-0.319

Length

470 amino acids

Sequence
(BLAST)

001: MALAVSTTSS SSAAAAASSS FFSRLGSSSD AKAPQIGSFR FPERSLVSSV VVNVTQRRSL VRPLNAEPQR NDSIVPLAAT IVAPEVEKEE EDFEQIAKDL
101: ENASPLEIMD RALEKFGNDI AIAFSGAEDV ALIEYAHLTG RPYRVFSLDT GRLNPETYKF FDAVEKHYGI HIEYMFPDAV EVQALVRTKG LFSFYEDGHQ
201: ECCRVRKVRP LRRALKGLKA WITGQRKDQS PGTRSEIPVV QVDPVFEGLD GGIGSLVKWN PVANVNGLDI WSFLRTMDVP VNSLHSQGYV SIGCEPCTRP
301: VLPGQHEREG RWWWEDAKAK ECGLHKGNIK HEDAAQLNGN GASQANGSAT VADIFNSQDV VSLSRSGIEN LAKLENRKEP WLVVLYAPWC RFCQAMEESY
401: VDLAEKLAGS GVKVAKFRAD GDQKEYAKTE LQLGSFPTIL LFPKHSSQPI KYPSEKRDVD SLTAFVNALR

Best Arabidopsis Sequence Match ( AT4G04610.1 )
(BLAST)

001: MAMSVNVSSS SSSGIINSRF GVSLEPKVSQ IGSLRLLDRV HVAPVSLNLS GKRSSSVKPL NAEPKTKDSM IPLAATMVAE IAEEVEVVEI EDFEELAKKL
101: ENASPLEIMD KALEKYGNDI AIAFSGAEDV ALIEYAHLTG RPFRVFSLDT GRLNPETYRF FDAVEKHYGI RIEYMFPDSV EVQGLVRSKG LFSFYEDGHQ
201: ECCRVRKVRP LRRALKGLKA WITGQRKDQS PGTRSEIPVV QVDPVFEGLD GGVGSLVKWN PVANVEGNDV WNFLRTMDVP VNTLHAAGYI SIGCEPCTKA
301: VLPGQHEREG RWWWEDAKAK ECGLHKGNVK ENSDDAKVNG ESKSAVADIF KSENLVTLSR QGIENLMKLE NRKEPWIVVL YAPWCPFCQA MEASYDELAD
401: KLAGSGIKVA KFRADGDQKE FAKQELQLGS FPTILVFPKN SSRPIKYPSE KRDVESLTSF LNLVR

Arabidopsis Description

APR15'-adenylylsulfate reductase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P92979]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.