CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER90880
KXG33434

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G62180.1	EER90880	AT1G05410.1	21798944
AT4G21990.1	KXG33434	AT5G61010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d006467_P002	Maize	plastid	86.3	87.06
Zm00001d021596_P001	Maize	plastid	87.17	86.98
HORVU0Hr1G003890.1	Barley	plastid	80.0	80.35
TraesCS2B01G275100.1	Wheat	plastid	80.22	79.7
GSMUA_Achr2P13890_001	Banana	cytosol	62.83	79.61
TraesCS2A01G225200.1	Wheat	plastid	80.0	79.48
Os07t0509800-01	Rice	endoplasmic reticulum	81.74	78.83
TraesCS2D01G231100.1	Wheat	plastid	78.48	78.31
Bra018501.1-P	Field mustard	cytosol	17.61	72.32
Solyc03g031620.2.1	Tomato	plastid	68.48	69.08
AT1G62180.1	Thale cress	plastid	68.04	68.94
CDY16659	Canola	plastid	68.48	68.93
PGSC0003DMT400013022	Potato	plastid	68.26	68.86
Solyc02g032860.2.1	Tomato	plastid	68.04	68.64
PGSC0003DMT400051168	Potato	plastid	68.04	68.19
Solyc02g080640.2.1	Tomato	plastid	68.26	68.11
KRH36471	Soybean	plastid	69.57	68.09
Bra029505.1-P	Field mustard	plastid	67.61	68.05
PGSC0003DMT400042488	Potato	plastid	68.04	68.04
KRH51108	Soybean	plastid	68.26	67.38
Bra013579.1-P	Field mustard	plastid	68.48	67.31
KRH11444	Soybean	plastid	68.7	66.95
AT4G21990.1	Thale cress	plastid	66.3	66.59
CDX94560	Canola	plastid	66.52	66.52
Bra019406.1-P	Field mustard	plastid	67.61	66.45
CDX79117	Canola	plastid	67.83	66.38
CDX82892	Canola	plastid	67.61	66.17
CDX94072	Canola	plastid	66.52	65.95
AT4G04610.1	Thale cress	plastid	66.52	65.81
CDX98723	Canola	plastid	66.74	65.6
VIT_12s0059g00760.t01	Wine grape	plastid	66.3	65.31
CDY24876	Canola	plastid	67.83	64.73
CDY07244	Canola	plastid	67.61	64.66
Bra034466.1-P	Field mustard	plastid	67.17	64.51
CDY33547	Canola	mitochondrion	23.91	64.33
CDX97317	Canola	cytosol, peroxisome, plastid	20.87	55.81
Bra018502.1-P	Field mustard	cytosol, peroxisome, plastid	20.87	55.81

Protein Annotations

KEGG:00920+1.8.4.8	KEGG:00920+1.8.4.9	MapMan:25.2.1.3	Gene3D:3.40.30.10	Gene3D:3.40.50.620	EntrezGene:8080734
InterPro:APS_reductase	UniProt:C5X9E4	EnsemblPlants:EER99437	ProteinID:EER99437	ProteinID:EER99437.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004604	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016671	GO:GO:0019344
GO:GO:0019419	GO:GO:0019725	GO:GO:0045454	GO:GO:0055114	InterPro:IPR013766	InterPro:IPR014729
InterPro:PAPS_reduct	PFAM:PF00085	PFAM:PF01507	PFscan:PS51352	PANTHER:PTHR23293	PANTHER:PTHR23293:SF13
MetaCyc:PWY-6932	InterPro:Rossmann-like_a/b/a_fold	EnsemblPlantsGene:SORBI_3002G314300	SUPFAM:SSF52402	SUPFAM:SSF52833	TIGRFAMs:TIGR00424
TIGRFAMs:TIGR02055	InterPro:Thioredoxin-indep_APS_Rdtase	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI0001A8405B	RefSeq:XP_002462916.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:68782845..68788146

Molecular Weight (calculated)

50036.6 Da

IEP (calculated)

7.777

GRAVY (calculated)

-0.218

Length

460 amino acids

Sequence
(BLAST)

001: MASATTSISS HPAALRDVVQ AARIGALRQQ VGVAPAAARG QRARAVRPLR AAEPARQPVA ASAAAAAPAA PMADEAAAAL AAVDYEALAR ELDGASPLEI
101: MDRALAMFGS EIAIAFSGAE DVALIEYAKL TGRPFRVFSL DTGRLNPETY QFFDQVEKHY GIRIEYMFPD ASEVQELVRT KGLFSFYDDG HQECCRVRKV
201: RPLRRALKGL RAWITGQRKD QSPGTRASIP LVQVDPSFEG LDGGAGSLIK WNPVANVDGK DIWTFLRTMD VPVNTLHAQG YVSIGCEPCT RPVLPGQHER
301: EGRWWWEDAK AKECGLHKGN IEKDGQAAAP RSANGNGSAG APDIFESPAV VSLTRAGIEN LLRLENRAEP WLVVLYAPWC PFCQAMEASY VELAEKLAGS
401: GVKVAKFRAD GEQKPFAQAE LQLQSFPTVL LFPSRTPRPI KYPSEKRDVD SLLAFVNSLR

Best Arabidopsis Sequence Match ( AT4G21990.1 )
(BLAST)

001: MALAINVSSS SSSAISSSSF PSSDLKVTKI GSLRLLNRTN VSAASLSLSG KRSSVKALNV QSITKESIVA SEVTEKLDVV EVEDFEELAK RLENASPLEI
101: MDKALEKFGN DIAIAFSGAE DVALIEYAHL TGRPYRVFSL DTGRLNPETY RLFDTVEKHY GIRIEYMFPD AVEVQALVRN KGLFSFYEDG HQECCRIRKV
201: RPLRRALKGL RAWITGQRKD QSPGTRSEIP VVQVDPVFEG LDGGVGSLVK WNPVANVEGN DVWNFLRTMD VPVNTLHAAG YVSIGCEPCT RAVLPGQHER
301: EGRWWWEDAK AKECGLHKGN IKENTNGNAT ANVNGTASVA DIFNSENVVN LSRQGIENLM KLENRKEAWI VVLYAPWCPF CQAMEASFDE LADKLGGSGV
401: KVAKFRADGD QKDFAKKELQ LGSFPTILVF PKNSSRPIKY PSEKRDVDSL TSFLNLVR

Arabidopsis Description

APR35'-adenylylsulfate reductase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P92980]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.