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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 9
PPI

Inferred distinct locusB in Crop

locusBlocations
CDY02176
CDY23090

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX98723 Canola plastid 98.28 97.44
Bra019406.1-P Field mustard plastid 94.18 93.38
AT4G21990.1 Thale cress plastid 89.87 91.05
CDX82892 Canola plastid 90.09 88.94
CDX79117 Canola plastid 87.93 86.81
CDY16659 Canola plastid 79.96 81.18
CDX94560 Canola plastid 78.23 78.91
GSMUA_Achr2P13890_001 Banana cytosol 59.7 76.31
VIT_10s0116g01650.t01 Wine grape plastid 72.63 73.26
Solyc02g080640.2.1 Tomato plastid 72.2 72.67
CDY33547 Canola mitochondrion 26.72 72.51
PGSC0003DMT400042488 Potato plastid 71.77 72.39
Solyc02g032860.2.1 Tomato plastid 70.69 71.93
Solyc03g031620.2.1 Tomato plastid 70.47 71.71
PGSC0003DMT400051168 Potato plastid 70.91 71.68
PGSC0003DMT400013022 Potato plastid 70.04 71.27
CDY07244 Canola plastid 73.71 71.1
CDY24876 Canola plastid 73.71 70.95
Zm00001d021596_P001 Maize plastid 68.1 68.55
Zm00001d006467_P002 Maize plastid 65.73 66.89
TraesCS2B01G275100.1 Wheat plastid 66.38 66.52
EER99437 Sorghum plastid 65.95 66.52
VIT_00s1490g00010.t01 Wine grape plastid 29.96 66.51
TraesCS2D01G231100.1 Wheat plastid 65.95 66.38
TraesCS2A01G225200.1 Wheat plastid 66.16 66.31
HORVU0Hr1G003890.1 Barley plastid 65.3 66.16
CDX97317 Canola cytosol, peroxisome, plastid 24.14 65.12
Os07t0509800-01 Rice endoplasmic reticulum 65.73 63.94
Protein Annotations
KEGG:00920+1.8.4.9MapMan:25.2.1.3Gene3D:3.40.30.10Gene3D:3.40.50.620GO:A0A078DYV1EnsemblPlants:CDX94072
ProteinID:CDX94072ProteinID:CDX94072.1GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005623
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016671GO:GO:0019419GO:GO:0019725
GO:GO:0045454GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00156974001InterPro:IPR013766InterPro:IPR014729InterPro:PAPS_reduct
PFAM:PF00085PFAM:PF01507PFscan:PS51352PANTHER:PTHR23293PANTHER:PTHR23293:SF13MetaCyc:PWY-6932
InterPro:Rossmann-like_a/b/a_foldSUPFAM:SSF52402SUPFAM:SSF52833TIGRFAMs:TIGR00424InterPro:Thioredoxin-indep_APS_RdtaseInterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_domainUniParc:UPI0004EEBC8DSEG:seg:::
Description
BnaC07g37060D
Coordinates
chrLK031879:-:473658..475919
Molecular Weight (calculated)
51515.2 Da
IEP (calculated)
6.531
GRAVY (calculated)
-0.303
Length
464 amino acids
Sequence
(BLAST)
001: MALAINVSSS SSSISTSSFP SSDLKAPQIG WLRLSDRINV SSASLSVSGK RSSVKALNVQ SITKESTVPP QAASMVASEI REKVDVIEVE DFEELAKKLE
101: TASPLEIMDK ALEKFGNDIA IAFSGAEDVA LIEYAHLTGR PYRVFSLDTG RLNPETYRLF DTVEKHYGIR IEYMFPDAVE VQALVRNKGL FSFYEDGHQE
201: CCRIRKVRPL RRALKGLRAW ITGQRKDQSP GTRSEIPVVQ VDPVFEGLDG GVGSLVKWNP VANVEGNDVW SFLRTMDVPV NTLHAAGYVS IGCEPCTRAV
301: LPGQHEREGR WWWEDAKAKE CGLHKGNIKE SNATVNVNGT TSTVDDIFRS ENVVSLSRQG IENLMKLENR KEAWIVVLYA PWCPFCQAME ASFDELADKL
401: KGGDGVKVAK FRADGDQKEF AKSELQLGSF PTILVFPKNS SRPIKYPSEK RDVDSLTSFL NLVR
Best Arabidopsis Sequence Match ( AT4G21990.1 )
(BLAST)
001: MALAINVSSS SSSAISSSSF PSSDLKVTKI GSLRLLNRTN VSAASLSLSG KRSSVKALNV QSITKESIVA SEVTEKLDVV EVEDFEELAK RLENASPLEI
101: MDKALEKFGN DIAIAFSGAE DVALIEYAHL TGRPYRVFSL DTGRLNPETY RLFDTVEKHY GIRIEYMFPD AVEVQALVRN KGLFSFYEDG HQECCRIRKV
201: RPLRRALKGL RAWITGQRKD QSPGTRSEIP VVQVDPVFEG LDGGVGSLVK WNPVANVEGN DVWNFLRTMD VPVNTLHAAG YVSIGCEPCT RAVLPGQHER
301: EGRWWWEDAK AKECGLHKGN IKENTNGNAT ANVNGTASVA DIFNSENVVN LSRQGIENLM KLENRKEAWI VVLYAPWCPF CQAMEASFDE LADKLGGSGV
401: KVAKFRADGD QKDFAKKELQ LGSFPTILVF PKNSSRPIKY PSEKRDVDSL TSFLNLVR
Arabidopsis Description
APR35'-adenylylsulfate reductase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P92980]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.