CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
peroxisome 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra018501.1-P	Field mustard	cytosol	33.92	51.79
VIT_00s1490g00010.t01	Wine grape	plastid	43.27	35.41
GSMUA_Achr2P13890_001	Banana	cytosol	60.23	28.37
CDX94560	Canola	plastid	74.27	27.61
CDY16659	Canola	plastid	73.68	27.57
CDX94072	Canola	plastid	72.51	26.72
AT4G04610.1	Thale cress	plastid	71.93	26.45
CDX98723	Canola	plastid	71.93	26.28
CDX79117	Canola	plastid	71.34	25.96
PGSC0003DMT400042488	Potato	plastid	69.59	25.87
Solyc02g080640.2.1	Tomato	plastid	69.59	25.81
CDX82892	Canola	plastid	70.76	25.74
PGSC0003DMT400051168	Potato	plastid	69.01	25.71
Solyc02g032860.2.1	Tomato	plastid	68.42	25.66
VIT_10s0116g01650.t01	Wine grape	plastid	67.84	25.22
CDX97317	Canola	cytosol, peroxisome, plastid	25.15	25.0
PGSC0003DMT400013022	Potato	plastid	65.5	24.56
Solyc03g031620.2.1	Tomato	plastid	64.91	24.34
CDY07244	Canola	plastid	67.84	24.12
Zm00001d021596_P001	Maize	plastid	64.91	24.08
EER99437	Sorghum	plastid	64.33	23.91
Zm00001d006467_P002	Maize	plastid	63.74	23.9
CDY24876	Canola	plastid	67.25	23.86
HORVU0Hr1G003890.1	Barley	plastid	62.57	23.36
TraesCS2D01G231100.1	Wheat	plastid	62.57	23.21
TraesCS2A01G225200.1	Wheat	plastid	62.57	23.11
TraesCS2B01G275100.1	Wheat	plastid	62.57	23.11
Os07t0509800-01	Rice	endoplasmic reticulum	63.74	22.85

Protein Annotations

EnsemblPlants:CDY33547	EnsemblPlantsGene:GSBRNA2T00054823001	Gene3D:3.40.50.620	GO:A0A078H7X9	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:IPR014729	InterPro:PAPS_reduct	InterPro:Rossmann-like_a/b/a_fold	PANTHER:PTHR23293
PANTHER:PTHR23293:SF13	PFAM:PF01507	ProteinID:CDY33547	ProteinID:CDY33547.1	SUPFAM:SSF52402	UniParc:UPI0004EDC2DF
UniProt:A0A078H7X9	MapMan:25.2.1.3	:	:	:	:

Description

BnaC02g26090DBnaC02g26090D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H7X9]

Coordinates

chrLK032316:+:408702..409467

Molecular Weight (calculated)

19855.9 Da

IEP (calculated)

8.846

GRAVY (calculated)

-0.292

Length

171 amino acids

Sequence
(BLAST)

001: MLHLLRLWIK PSRHSGTILP SQLEDVALIE YARLTGRPYS VFSLDTGSLN PETYRFFDEV ERHYGIRIEF MFPDSVEVQG LVRNKGLFSF YEDGHQECCR
101: VRKRKDQSPG TWSEIPVVQV DPVFQGLDGG AGSLVKWNPV ANVERNHVWS FLRAMTFRLT HCTRRMLRVT I

Best Arabidopsis Sequence Match ( AT1G62180.1 )
(BLAST)

001: MALAVTSSST AISGSSFSRS GASSESKALQ ICSIRLSDRT HLSQRRYSMK PLNAESHSRS ESWVTRASTL IAPEVEEKGG EVEDFEQLAK KLEDASPLEI
101: MDKALERFGD QIAIAFSGAE DVALIEYARL TGKPFRVFSL DTGRLNPETY RLFDAVEKQY GIRIEYMFPD AVEVQALVRN KGLFSFYEDG HQECCRVRKV
201: RPLRRALKGL KAWITGQRKD QSPGTRSEIP IVQVDPVFEG LDGGVGSLVK WNPLANVEGA DVWNFLRTMD VPVNALHAQG YVSIGCEPCT RPVLPGQHER
301: EGRWWWEDAK AKECGLHKGN IKEEDGAADS KPAAVQEIFE SNNVVALSKG GVENLLKLEN RKEAWLVVLY APWCPFCQAM EASYIELAEK LAGKGVKVAK
401: FRADGEQKEF AKQELQLGSF PTILLFPKRA PRAIKYPSEH RDVDSLMSFV NLLR

Arabidopsis Description

APR25'-adenylylsulfate reductase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P92981]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.