CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
plastid 3
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra018502.1-P	Field mustard	cytosol, peroxisome, plastid	100.0	100.0
GSMUA_Achr2P13890_001	Banana	cytosol	54.07	25.62
CDY33547	Canola	mitochondrion	25.0	25.15
CDY16659	Canola	plastid	66.28	24.95
CDX94560	Canola	plastid	66.28	24.78
CDX94072	Canola	plastid	65.12	24.14
CDX79117	Canola	plastid	65.7	24.04
CDX82892	Canola	plastid	65.7	24.04
CDX98723	Canola	plastid	64.53	23.72
PGSC0003DMT400042488	Potato	plastid	58.14	21.74
VIT_10s0116g01650.t01	Wine grape	plastid	57.56	21.52
KRH36471	Soybean	plastid	58.72	21.49
Solyc02g080640.2.1	Tomato	plastid	57.56	21.48
KRH51108	Soybean	plastid	58.14	21.46
Solyc02g032860.2.1	Tomato	plastid	56.4	21.27
Zm00001d021596_P001	Maize	plastid	56.98	21.26
PGSC0003DMT400051168	Potato	plastid	56.4	21.13
CDY07244	Canola	plastid	58.72	21.0
EER99437	Sorghum	plastid	55.81	20.87
Zm00001d006467_P002	Maize	plastid	55.23	20.83
CDY24876	Canola	plastid	58.14	20.75
Solyc03g031620.2.1	Tomato	plastid	54.65	20.61
KRH11444	Soybean	plastid	56.4	20.55
PGSC0003DMT400013022	Potato	plastid	54.07	20.39
Os07t0509800-01	Rice	endoplasmic reticulum	56.4	20.34
HORVU0Hr1G003890.1	Barley	plastid	53.49	20.09
TraesCS2A01G225200.1	Wheat	plastid	54.07	20.09
TraesCS2B01G275100.1	Wheat	plastid	54.07	20.09
TraesCS2D01G231100.1	Wheat	plastid	53.49	19.96
VIT_00s1490g00010.t01	Wine grape	plastid	5.81	4.78

Protein Annotations

EnsemblPlants:CDX97317	EnsemblPlantsGene:GSBRNA2T00104381001	Gene3D:3.40.30.10	Gene3D:3.40.50.620	GO:A0A078E8F0	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	InterPro:IPR014729	InterPro:PAPS_reduct	InterPro:Rossmann-like_a/b/a_fold
InterPro:Thioredoxin-like_sf	PANTHER:PTHR23293	PANTHER:PTHR23293:SF13	PFAM:PF01507	ProteinID:CDX97317	ProteinID:CDX97317.1
SEG:seg	SUPFAM:SSF52402	SUPFAM:SSF52833	UniParc:UPI0002548112	MapMan:35.1	:

Description

BnaA02g21080D

Coordinates

chrLK031898:-:887248..888180

Molecular Weight (calculated)

19101.0 Da

IEP (calculated)

10.027

GRAVY (calculated)

-0.349

Length

172 amino acids

Sequence
(BLAST)

001: MGGKRESYGL MNTRTVDEEK SGRRKSLVAE RIAREKKRNV DPVFQGLDGG AGSLVKWNPV ANVERNHVWS FLRAMDVPVN TLHAKGSMDC CVVCSLVSLL
101: SYAELADKLA GSGVKVVKFR ADGDQKEFAK QELQLGSFPT ILVFPKNSSR PIKDPSEKRD VDSLTLFFNL VR

Best Arabidopsis Sequence Match ( AT4G04610.1 )
(BLAST)

001: MAMSVNVSSS SSSGIINSRF GVSLEPKVSQ IGSLRLLDRV HVAPVSLNLS GKRSSSVKPL NAEPKTKDSM IPLAATMVAE IAEEVEVVEI EDFEELAKKL
101: ENASPLEIMD KALEKYGNDI AIAFSGAEDV ALIEYAHLTG RPFRVFSLDT GRLNPETYRF FDAVEKHYGI RIEYMFPDSV EVQGLVRSKG LFSFYEDGHQ
201: ECCRVRKVRP LRRALKGLKA WITGQRKDQS PGTRSEIPVV QVDPVFEGLD GGVGSLVKWN PVANVEGNDV WNFLRTMDVP VNTLHAAGYI SIGCEPCTKA
301: VLPGQHEREG RWWWEDAKAK ECGLHKGNVK ENSDDAKVNG ESKSAVADIF KSENLVTLSR QGIENLMKLE NRKEPWIVVL YAPWCPFCQA MEASYDELAD
401: KLAGSGIKVA KFRADGDQKE FAKQELQLGS FPTILVFPKN SSRPIKYPSE KRDVESLTSF LNLVR

Arabidopsis Description

APR15'-adenylylsulfate reductase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P92979]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.