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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 9
PPI

Inferred distinct locusB in Crop

locusBlocations
CDY10107
CDY47288

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY24876 Canola plastid 95.22 95.02
AT1G62180.1 Thale cress plastid 84.82 89.87
CDY16659 Canola plastid 72.77 76.59
GSMUA_Achr2P13890_001 Banana cytosol 57.8 76.58
CDX94560 Canola plastid 71.1 74.35
PGSC0003DMT400051168 Potato plastid 70.48 73.86
CDX94072 Canola plastid 71.1 73.71
CDX79117 Canola plastid 71.52 73.19
CDX98723 Canola plastid 71.1 73.08
PGSC0003DMT400042488 Potato plastid 69.85 73.04
CDX82892 Canola plastid 71.31 72.98
Solyc02g032860.2.1 Tomato plastid 68.81 72.59
Solyc02g080640.2.1 Tomato plastid 69.44 72.45
VIT_10s0116g01650.t01 Wine grape plastid 69.23 72.39
PGSC0003DMT400013022 Potato plastid 67.57 71.27
Solyc03g031620.2.1 Tomato plastid 67.36 71.05
Zm00001d021596_P001 Maize plastid 66.53 69.41
Zm00001d006467_P002 Maize plastid 65.7 69.3
CDY33547 Canola mitochondrion 24.12 67.84
HORVU0Hr1G003890.1 Barley plastid 64.45 67.69
EER99437 Sorghum plastid 64.66 67.61
TraesCS2B01G275100.1 Wheat plastid 65.07 67.6
TraesCS2A01G225200.1 Wheat plastid 64.86 67.39
TraesCS2D01G231100.1 Wheat plastid 64.45 67.25
VIT_00s1490g00010.t01 Wine grape plastid 28.27 65.07
Os07t0509800-01 Rice endoplasmic reticulum 63.2 63.73
CDX97317 Canola cytosol, peroxisome, plastid 21.0 58.72
Protein Annotations
KEGG:00920+1.8.4.9MapMan:25.2.1.3Gene3D:3.40.30.10Gene3D:3.40.50.620GO:A0A078F2S1EnsemblPlants:CDY07244
ProteinID:CDY07244ProteinID:CDY07244.1ncoils:CoilGO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0005623GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016671GO:GO:0019419
GO:GO:0019725GO:GO:0045454GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00124039001InterPro:IPR013766InterPro:IPR014729
InterPro:PAPS_reductPFAM:PF00085PFAM:PF01507PFscan:PS51352PANTHER:PTHR23293PANTHER:PTHR23293:SF13
MetaCyc:PWY-6932InterPro:Rossmann-like_a/b/a_foldSUPFAM:SSF52402SUPFAM:SSF52833TIGRFAMs:TIGR00424InterPro:Thioredoxin-indep_APS_Rdtase
InterPro:Thioredoxin-like_sfInterPro:Thioredoxin_domainUniParc:UPI0004EEFACCSEG:seg::
Description
BnaC04g19270D
Coordinates
chrLK031976:-:60316..63008
Molecular Weight (calculated)
53997.5 Da
IEP (calculated)
7.264
GRAVY (calculated)
-0.360
Length
481 amino acids
Sequence
(BLAST)
001: MALAVTSSST AISGSSFSRS GPSSDPKALQ ICSFRLSELS HVSQRRYSLK SLKAESHTRN DSLVTRASTL ITPEVEEKEE DVEDFEQLAK KLEEASPLEI
101: MDKALQKFRS NIAIAFSGAE DVALIEYARL TGRPFRVFSL DTGRLNPETY RLFDAVEKQY GIRIEYTFPD AVEVQALVRN KGLFSFYEDG HQECCRVRKV
201: RPLRRALKGL KAWITGQRKD QSPGTRSEIP IVQVDPVFEG LDGGVGSLVK WNPLANVEGG DVWNFLRTMD VPVNALHAQG YVSIGCEPCT RPVLPGQHER
301: EGRWWWEDAK AKECGLHKGN IKKEDDTTAD LAPAIVHDIF ESNNVVALSR GGIENLLKLG NRKEPWLVVL YAPWCPFCQA MEASYVELAE KLAVKGVKVA
401: KFRADGDQKE FAKQELQLGS FPTILLFPKS APRAIKYPSE HRDVDSLMSF VNLLRFVRKH DDKELVVELM GTTLTRVRES H
Best Arabidopsis Sequence Match ( AT1G62180.1 )
(BLAST)
001: MALAVTSSST AISGSSFSRS GASSESKALQ ICSIRLSDRT HLSQRRYSMK PLNAESHSRS ESWVTRASTL IAPEVEEKGG EVEDFEQLAK KLEDASPLEI
101: MDKALERFGD QIAIAFSGAE DVALIEYARL TGKPFRVFSL DTGRLNPETY RLFDAVEKQY GIRIEYMFPD AVEVQALVRN KGLFSFYEDG HQECCRVRKV
201: RPLRRALKGL KAWITGQRKD QSPGTRSEIP IVQVDPVFEG LDGGVGSLVK WNPLANVEGA DVWNFLRTMD VPVNALHAQG YVSIGCEPCT RPVLPGQHER
301: EGRWWWEDAK AKECGLHKGN IKEEDGAADS KPAAVQEIFE SNNVVALSKG GVENLLKLEN RKEAWLVVLY APWCPFCQAM EASYIELAEK LAGKGVKVAK
401: FRADGEQKEF AKQELQLGSF PTILLFPKRA PRAIKYPSEH RDVDSLMSFV NLLR
Arabidopsis Description
APR25'-adenylylsulfate reductase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P92981]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.