CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
CDY10107
CDY47288

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G62180.1	CDY10107	AT1G05410.1	21798944
AT1G62180.1	CDY47288	AT1G05410.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra034466.1-P	Field mustard	plastid	97.72	98.33
CDY07244	Canola	plastid	95.02	95.22
AT1G62180.1	Thale cress	plastid	83.82	88.99
GSMUA_Achr2P13890_001	Banana	cytosol	58.09	77.14
CDY16659	Canola	plastid	72.41	76.37
CDX94560	Canola	plastid	70.75	74.13
CDX94072	Canola	plastid	70.95	73.71
PGSC0003DMT400051168	Potato	plastid	70.12	73.64
CDX98723	Canola	plastid	70.95	73.08
CDX79117	Canola	plastid	71.16	72.98
CDX82892	Canola	plastid	70.95	72.77
VIT_10s0116g01650.t01	Wine grape	plastid	69.09	72.39
PGSC0003DMT400042488	Potato	plastid	69.09	72.39
Solyc02g032860.2.1	Tomato	plastid	68.46	72.37
Solyc02g080640.2.1	Tomato	plastid	69.09	72.23
PGSC0003DMT400013022	Potato	plastid	67.01	70.83
Solyc03g031620.2.1	Tomato	plastid	66.81	70.61
Zm00001d006467_P002	Maize	plastid	65.77	69.52
Zm00001d021596_P001	Maize	plastid	66.39	69.41
TraesCS2B01G275100.1	Wheat	plastid	65.56	68.25
HORVU0Hr1G003890.1	Barley	plastid	64.73	68.12
TraesCS2A01G225200.1	Wheat	plastid	65.35	68.03
TraesCS2D01G231100.1	Wheat	plastid	64.94	67.9
EER99437	Sorghum	plastid	64.73	67.83
CDY33547	Canola	mitochondrion	23.86	67.25
VIT_00s1490g00010.t01	Wine grape	plastid	28.42	65.55
Os07t0509800-01	Rice	endoplasmic reticulum	63.28	63.94
CDX97317	Canola	cytosol, peroxisome, plastid	20.75	58.14

Protein Annotations

KEGG:00920+1.8.4.9	MapMan:25.2.1.3	Gene3D:3.40.30.10	Gene3D:3.40.50.620	GO:A0A078GHM5	UniProt:A0A078GHM5
EnsemblPlants:CDY24876	ProteinID:CDY24876	ProteinID:CDY24876.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016671
GO:GO:0019419	GO:GO:0019725	GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00028621001	InterPro:IPR013766
InterPro:IPR014729	InterPro:PAPS_reduct	PFAM:PF00085	PFAM:PF01507	PFscan:PS51352	PANTHER:PTHR23293
PANTHER:PTHR23293:SF13	MetaCyc:PWY-6932	InterPro:Rossmann-like_a/b/a_fold	SUPFAM:SSF52402	SUPFAM:SSF52833	TIGRFAMs:TIGR00424
InterPro:Thioredoxin-indep_APS_Rdtase	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI0004EE50F0	SEG:seg	:

Description

BnaA03g59800DBnaA03g59800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GHM5]

Coordinates

chrLK032165:-:209643..212008

Molecular Weight (calculated)

53883.4 Da

IEP (calculated)

7.447

GRAVY (calculated)

-0.348

Length

482 amino acids

Sequence
(BLAST)

001: MALAVTSSST AISGSSFSRS GPCSDRKALQ ICSFRLSDLS HVSQRRYSLK SLKAESPPTR NDSLVTRAST LITPGVEEKE EDVEDFEQLA KKLEEASPLE
101: IMDKALQKFG SNIAIAFSGA EDVALIEYAR LTGRPFRVFS LDTGRLNPET YRLFDAVEKQ YGIRIEYTFP DAVEVQALVR NKGLFSFYED GHQECCRVRK
201: VRPLRRALKG LKAWITGQRK DQSPGTRSEI PIVQVDPVFE GLDGGVGSLV KWNPLANVEG GDVWNFLRTM DVPVNALHAQ GYVSIGCEPC TRPVLPGQHE
301: REGRWWWEDA KAKECGLHKG NIKKEDDSTT ADLAPAIVHD IFESSNVVAL SRGGIENLLK LGNRKEPWLV VLYAPWCPFC QAMEASYVEL AEKLAVKGIK
401: VAKFRADGDQ KEFAKQELQL GSFPTILLFP KSAPRAIKYP SEHRDVDSLM SFVNLLRSVR KHDDKELLLE LMATLTRGRE SY

Best Arabidopsis Sequence Match ( AT1G62180.1 )
(BLAST)

001: MALAVTSSST AISGSSFSRS GASSESKALQ ICSIRLSDRT HLSQRRYSMK PLNAESHSRS ESWVTRASTL IAPEVEEKGG EVEDFEQLAK KLEDASPLEI
101: MDKALERFGD QIAIAFSGAE DVALIEYARL TGKPFRVFSL DTGRLNPETY RLFDAVEKQY GIRIEYMFPD AVEVQALVRN KGLFSFYEDG HQECCRVRKV
201: RPLRRALKGL KAWITGQRKD QSPGTRSEIP IVQVDPVFEG LDGGVGSLVK WNPLANVEGA DVWNFLRTMD VPVNALHAQG YVSIGCEPCT RPVLPGQHER
301: EGRWWWEDAK AKECGLHKGN IKEEDGAADS KPAAVQEIFE SNNVVALSKG GVENLLKLEN RKEAWLVVLY APWCPFCQAM EASYIELAEK LAGKGVKVAK
401: FRADGEQKEF AKQELQLGSF PTILLFPKRA PRAIKYPSEH RDVDSLMSFV NLLR

Arabidopsis Description

APR25'-adenylylsulfate reductase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P92981]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.