Factsheet for HORVU0Hr1G003890.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU3Hr1G073850.1
HORVU3Hr1G073910.1
HORVU5Hr1G094660.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G62180.1	HORVU5Hr1G094660.1	AT1G05410.1	21798944
AT4G21990.1	HORVU3Hr1G073850.1	AT5G61010.1	21798944
AT4G21990.1	HORVU3Hr1G073910.1	AT5G61010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G275100.1	Wheat	plastid	93.67	92.66
TraesCS2A01G225200.1	Wheat	plastid	93.23	92.22
TraesCS2D01G231100.1	Wheat	plastid	91.7	91.11
Zm00001d021596_P001	Maize	plastid	84.06	83.51
Zm00001d006467_P002	Maize	plastid	82.31	82.68
EER99437	Sorghum	plastid	80.35	80.0
GSMUA_Achr2P13890_001	Banana	cytosol	62.88	79.34
Os07t0509800-01	Rice	endoplasmic reticulum	77.73	74.63
Bra018501.1-P	Field mustard	cytosol	17.47	71.43
Solyc02g032860.2.1	Tomato	plastid	68.78	69.08
AT1G62180.1	Thale cress	plastid	67.9	68.5
PGSC0003DMT400042488	Potato	plastid	68.78	68.48
PGSC0003DMT400013022	Potato	plastid	68.12	68.42
PGSC0003DMT400051168	Potato	plastid	68.34	68.19
KRH36471	Soybean	plastid	69.87	68.09
Solyc03g031620.2.1	Tomato	plastid	67.69	67.98
Solyc02g080640.2.1	Tomato	plastid	68.12	67.68
CDY16659	Canola	plastid	67.47	67.61
Bra029505.1-P	Field mustard	plastid	67.03	67.18
KRH51108	Soybean	plastid	68.34	67.17
AT4G21990.1	Thale cress	plastid	66.81	66.81
KRH11444	Soybean	plastid	68.78	66.74
Bra019406.1-P	Field mustard	plastid	67.69	66.24
AT4G04610.1	Thale cress	plastid	67.25	66.24
CDX94560	Canola	plastid	66.38	66.09
Bra013579.1-P	Field mustard	plastid	67.47	66.03
VIT_12s0059g00760.t01	Wine grape	plastid	66.81	65.52
CDX79117	Canola	plastid	67.03	65.32
CDX94072	Canola	plastid	66.16	65.3
CDX98723	Canola	plastid	66.38	64.96
CDY24876	Canola	plastid	68.12	64.73
Bra034466.1-P	Field mustard	plastid	67.47	64.51
CDX82892	Canola	plastid	66.16	64.47
CDY07244	Canola	plastid	67.69	64.45
CDY33547	Canola	mitochondrion	23.36	62.57
CDX97317	Canola	cytosol, peroxisome, plastid	20.09	53.49
Bra018502.1-P	Field mustard	cytosol, peroxisome, plastid	20.09	53.49

Protein Annotations

KEGG:00920+1.8.4.9	MapMan:25.2.1.3	Gene3D:3.40.30.10	Gene3D:3.40.50.620	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016671
GO:GO:0019419	GO:GO:0019725	GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:HORVU0Hr1G003890	EnsemblPlants:HORVU0Hr1G003890.1
InterPro:IPR013766	InterPro:IPR014729	UniProt:M0VNQ2	InterPro:PAPS_reduct	PFAM:PF00085	PFAM:PF01507
ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR23293	PANTHER:PTHR23293:SF13	InterPro:Rossmann-like_a/b/a_fold	SUPFAM:SSF52402
SUPFAM:SSF52833	TIGRFAMs:TIGR00424	InterPro:Thioredoxin-indep_APS_Rdtase	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain
UniParc:UPI0002962D4B	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchrUn:+:18554600..18558154

Molecular Weight (calculated)

50074.7 Da

IEP (calculated)

6.861

GRAVY (calculated)

-0.234

Length

458 amino acids

Sequence
(BLAST)

001: MASATASISS HSIALRDLKA ARIGAVRQQV AVPAAAPKGQ RARAVRPLCA AEPSRKPVSA SAASAPVAPV EEEASAAASV DYEALALELV DASPLEIMDR
101: ALDMFGSEIA IAFSGAEDVA LIEYAKLTGR PFRVFSLDTG RLNPETYQLF DKVEKHYGIH IEYMFPEASE VQDLVRTKGL FSFYEDGHQE CCRVRKVRPL
201: RRALKGLKAW ITGQRKDQSP GTRASIPVVQ VDPSFEGLDG GAGSLIKWNP VANVDGKDIW TFLRTMDVPV NTLHAQGYVS IGCEPCTRPV LPGQHEREGR
301: WWWEDATAKE CGLHKGNIDK EGQTPKVGVN GNGSAEASAP DIFQSQAIVN LTRPGIENLL RLENRAEPWL AVLYAPWCPY CQAMEASYVE LAEQLSGSGI
401: KVAKFRADGE QKSFAQAELQ LQSFPTILLF PGRTVKPIKY PSEKRDVQSL LAFVNTLR

Best Arabidopsis Sequence Match ( AT4G21990.1 )
(BLAST)

001: MALAINVSSS SSSAISSSSF PSSDLKVTKI GSLRLLNRTN VSAASLSLSG KRSSVKALNV QSITKESIVA SEVTEKLDVV EVEDFEELAK RLENASPLEI
101: MDKALEKFGN DIAIAFSGAE DVALIEYAHL TGRPYRVFSL DTGRLNPETY RLFDTVEKHY GIRIEYMFPD AVEVQALVRN KGLFSFYEDG HQECCRIRKV
201: RPLRRALKGL RAWITGQRKD QSPGTRSEIP VVQVDPVFEG LDGGVGSLVK WNPVANVEGN DVWNFLRTMD VPVNTLHAAG YVSIGCEPCT RAVLPGQHER
301: EGRWWWEDAK AKECGLHKGN IKENTNGNAT ANVNGTASVA DIFNSENVVN LSRQGIENLM KLENRKEAWI VVLYAPWCPF CQAMEASFDE LADKLGGSGV
401: KVAKFRADGD QKDFAKKELQ LGSFPTILVF PKNSSRPIKY PSEKRDVDSL TSFLNLVR

Arabidopsis Description

APR35'-adenylylsulfate reductase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P92980]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.