Factsheet for Solyc02g080640.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

plastid: 22908117

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc03g115070.1.1
Solyc06g054160.1.1
Solyc06g054170.1.1
Solyc06g054180.1.1
Solyc06g054190.1.1
Solyc06g054200.1.1
Solyc06g054210.1.1
Solyc06g054230.2.1
Solyc09g059740.1.1
Solyc09g059860.1.1
Solyc09g059870.1.1
Solyc09g059890.1.1
Solyc09g059900.1.1
Solyc09g059910.1.1
Solyc09g060010.1.1
Solyc09g060020.1.1
Solyc09g060060.1.1
Solyc09g061260.1.1
Solyc09g061360.1.1
Solyc09g061370.1.1
Solyc09g061490.1.1
Solyc09g061500.1.1
Solyc09g061560.1.1
Solyc09g061590.1.1
Solyc09g061600.1.1
Solyc09g082140.2.1
Solyc10g018690.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G62180.1	Solyc06g054160.1.1	AT1G05410.1	21798944
AT1G62180.1	Solyc06g054170.1.1	AT1G05410.1	21798944
AT1G62180.1	Solyc06g054180.1.1	AT1G05410.1	21798944
AT1G62180.1	Solyc06g054190.1.1	AT1G05410.1	21798944
AT1G62180.1	Solyc06g054200.1.1	AT1G05410.1	21798944
AT1G62180.1	Solyc06g054210.1.1	AT1G05410.1	21798944
AT1G62180.1	Solyc06g054230.2.1	AT1G05410.1	21798944
AT1G62180.1	Solyc09g059740.1.1	AT1G05410.1	21798944
AT1G62180.1	Solyc09g059860.1.1	AT1G05410.1	21798944
AT1G62180.1	Solyc09g059870.1.1	AT1G05410.1	21798944
AT1G62180.1	Solyc09g059890.1.1	AT1G05410.1	21798944
AT1G62180.1	Solyc09g059900.1.1	AT1G05410.1	21798944
AT1G62180.1	Solyc09g059910.1.1	AT1G05410.1	21798944
AT1G62180.1	Solyc09g060010.1.1	AT1G05410.1	21798944
AT1G62180.1	Solyc09g060020.1.1	AT1G05410.1	21798944
AT1G62180.1	Solyc09g060060.1.1	AT1G05410.1	21798944
AT1G62180.1	Solyc09g061260.1.1	AT1G05410.1	21798944
AT1G62180.1	Solyc09g061360.1.1	AT1G05410.1	21798944
AT1G62180.1	Solyc09g061370.1.1	AT1G05410.1	21798944
AT1G62180.1	Solyc09g061490.1.1	AT1G05410.1	21798944
AT1G62180.1	Solyc09g061500.1.1	AT1G05410.1	21798944
AT1G62180.1	Solyc09g061560.1.1	AT1G05410.1	21798944
AT1G62180.1	Solyc09g061590.1.1	AT1G05410.1	21798944
AT1G62180.1	Solyc09g061600.1.1	AT1G05410.1	21798944
AT1G62180.1	Solyc09g082140.2.1	AT1G05410.1	21798944
AT1G62180.1	Solyc10g018690.1.1	AT1G05410.1	21798944
AT4G21990.1	Solyc03g115070.1.1	AT5G61010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400042488	Potato	plastid	95.23	95.43
Solyc02g032860.2.1	Tomato	plastid	82.86	83.77
Solyc03g031620.2.1	Tomato	plastid	80.04	80.92
GSMUA_Achr2P13890_001	Banana	cytosol	63.34	80.44
KRH36471	Soybean	plastid	79.18	77.66
KRH11444	Soybean	plastid	78.96	77.12
Bra018501.1-P	Field mustard	cytosol	18.66	76.79
CDY16659	Canola	plastid	75.7	76.37
Bra029505.1-P	Field mustard	plastid	75.27	75.93
KRH51108	Soybean	plastid	75.49	74.68
CDX94560	Canola	plastid	74.4	74.57
AT1G62180.1	Thale cress	plastid	73.32	74.45
AT4G21990.1	Thale cress	plastid	73.54	74.02
VIT_12s0059g00760.t01	Wine grape	plastid	74.19	73.23
AT4G04610.1	Thale cress	plastid	73.75	73.12
Bra013579.1-P	Field mustard	plastid	73.54	72.44
CDX94072	Canola	plastid	72.67	72.2
CDX79117	Canola	plastid	73.1	71.7
CDX98723	Canola	plastid	72.45	71.37
CDX82892	Canola	plastid	72.67	71.28
Bra019406.1-P	Field mustard	plastid	72.02	70.94
CDY33547	Canola	mitochondrion	25.81	69.59
Zm00001d006467_P002	Maize	plastid	68.76	69.52
CDY07244	Canola	plastid	72.45	69.44
CDY24876	Canola	plastid	72.23	69.09
Zm00001d021596_P001	Maize	plastid	68.98	68.98
Bra034466.1-P	Field mustard	plastid	71.37	68.68
EER99437	Sorghum	plastid	68.11	68.26
HORVU0Hr1G003890.1	Barley	plastid	67.68	68.12
TraesCS2B01G275100.1	Wheat	plastid	67.9	67.6
TraesCS2D01G231100.1	Wheat	plastid	67.46	67.46
TraesCS2A01G225200.1	Wheat	plastid	67.68	67.39
Os07t0509800-01	Rice	endoplasmic reticulum	68.55	66.25
CDX97317	Canola	cytosol, peroxisome, plastid	21.48	57.56
Bra018502.1-P	Field mustard	cytosol, peroxisome, plastid	21.48	57.56

Protein Annotations

KEGG:00920+1.8.4.9	MapMan:25.2.1.3	Gene3D:3.40.30.10	Gene3D:3.40.50.620	EMBL:AY568717	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0004604	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016671	GO:GO:0019419
GO:GO:0019725	GO:GO:0045454	GO:GO:0055114	InterPro:IPR013766	InterPro:IPR014729	InterPro:PAPS_reduct
PFAM:PF00085	PFAM:PF01507	PFscan:PS51352	PANTHER:PTHR23293	PANTHER:PTHR23293:SF13	UniProt:Q672Q8
InterPro:Rossmann-like_a/b/a_fold	SUPFAM:SSF52402	SUPFAM:SSF52833	EnsemblPlantsGene:Solyc02g080640.2	EnsemblPlants:Solyc02g080640.2.1	TIGRFAMs:TIGR00424
InterPro:Thioredoxin-indep_APS_Rdtase	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI000042815C	SEG:seg	:

Description

Adenylyl-sulfate reductase [Source:UniProtKB/TrEMBL;Acc:Q672Q8]

Coordinates

chr2:+:44828450..44831959

Molecular Weight (calculated)

51148.6 Da

IEP (calculated)

6.334

GRAVY (calculated)

-0.364

Length

461 amino acids

Sequence
(BLAST)

001: MALTFTSSSA IHGSLSSSSS SYEQPKVSQL GTFQPLDRPQ LLSSTVLNSR RRSAVKPLYA EPKRNDSIVP SAATIVAPEV GESVEAEDFE KLAKELQNAS
101: PLEVMDKALE KFGDDIAIAF SGAEDVALIE YAHLTGRPYR VFSLDTGRLN PETYQLFDTV EKHYGIRIEY MFPDSVEVQA LVRTKGLFSF YEDGHQECCR
201: VRKVRPLRRA LKGLRAWITG QRKDQSPGTR SEIPIVQVDP SFEGLDGGAG SLVKWNPVAN VDGKDIWNFL RAMNVPVNSL HSQGYVSIGC EPCTRPVLPG
301: QHEREGRWWW EDAKAKECGL HKGNIKDETV NGAAQTNGTA TVADIFDTKD IVTLSKPGVE NLVKLEDRRE PWLVVLYAPW CQFCQAMEGS YVELAEKLAG
401: SGVKVGKFRA DGDQKAFAQE ELQLGSFPTI LFFPKHSSKA IKYPSEKRDV DSLLAFVNAL R

Best Arabidopsis Sequence Match ( AT4G21990.1 )
(BLAST)

001: MALAINVSSS SSSAISSSSF PSSDLKVTKI GSLRLLNRTN VSAASLSLSG KRSSVKALNV QSITKESIVA SEVTEKLDVV EVEDFEELAK RLENASPLEI
101: MDKALEKFGN DIAIAFSGAE DVALIEYAHL TGRPYRVFSL DTGRLNPETY RLFDTVEKHY GIRIEYMFPD AVEVQALVRN KGLFSFYEDG HQECCRIRKV
201: RPLRRALKGL RAWITGQRKD QSPGTRSEIP VVQVDPVFEG LDGGVGSLVK WNPVANVEGN DVWNFLRTMD VPVNTLHAAG YVSIGCEPCT RAVLPGQHER
301: EGRWWWEDAK AKECGLHKGN IKENTNGNAT ANVNGTASVA DIFNSENVVN LSRQGIENLM KLENRKEAWI VVLYAPWCPF CQAMEASFDE LADKLGGSGV
401: KVAKFRADGD QKDFAKKELQ LGSFPTILVF PKNSSRPIKY PSEKRDVDSL TSFLNLVR

Arabidopsis Description

APR35'-adenylylsulfate reductase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P92980]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.