Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- nucleus 3
- plastid 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g061360.1.1 | Tomato | nucleus | 62.88 | 79.81 |
| Solyc06g054210.1.1 | Tomato | nucleus | 78.79 | 78.79 |
| Solyc06g054170.1.1 | Tomato | cytosol | 78.03 | 78.03 |
| Solyc06g054190.1.1 | Tomato | cytosol | 78.03 | 78.03 |
| Solyc10g018690.1.1 | Tomato | cytosol | 31.82 | 49.41 |
| Solyc09g059860.1.1 | Tomato | cytosol | 29.55 | 48.15 |
| Solyc06g054230.2.1 | Tomato | cytosol | 68.94 | 27.74 |
| Solyc09g059740.1.1 | Tomato | cytosol | 58.33 | 27.6 |
| Solyc09g059890.1.1 | Tomato | cytosol | 43.18 | 25.79 |
| Solyc09g061260.1.1 | Tomato | cytosol | 58.33 | 22.38 |
| PGSC0003DMT400077585 | Potato | cytosol | 31.06 | 21.13 |
| Solyc09g060010.1.1 | Tomato | extracellular | 22.73 | 19.87 |
| Solyc09g059870.1.1 | Tomato | cytosol | 17.42 | 17.69 |
| Solyc09g059910.1.1 | Tomato | extracellular | 24.24 | 12.12 |
| VIT_05s0020g03600.t01 | Wine grape | cytosol | 41.67 | 11.13 |
| KRH77849 | Soybean | nucleus | 38.64 | 10.62 |
| AT1G05410.1 | Thale cress | cytosol | 37.88 | 10.62 |
| CDY47288 | Canola | cytosol | 37.12 | 10.4 |
| CDY10107 | Canola | cytosol | 37.12 | 10.4 |
| KRH27646 | Soybean | cytosol, nucleus | 37.12 | 10.27 |
| KRG99083 | Soybean | nucleus | 37.88 | 10.27 |
| Bra015422.1-P | Field mustard | cytosol | 35.61 | 10.02 |
| Solyc09g061500.1.1 | Tomato | cytosol | 4.55 | 4.8 |
| Solyc09g082130.2.1 | Tomato | nucleus | 13.64 | 4.35 |
| Solyc09g061580.1.1 | Tomato | cytosol | 3.79 | 4.31 |
| Solyc09g061370.1.1 | Tomato | cytosol | 6.06 | 4.12 |
| Solyc09g061540.1.1 | Tomato | cytosol | 3.03 | 3.45 |
| Solyc06g054200.1.1 | Tomato | cytosol | 5.3 | 3.17 |
| Solyc09g061560.1.1 | Tomato | mitochondrion | 3.79 | 2.98 |
| Solyc09g060060.1.1 | Tomato | cytosol | 0.76 | 1.67 |
| Solyc06g054180.1.1 | Tomato | cytosol | 3.03 | 1.62 |
| Solyc06g054160.1.1 | Tomato | cytosol, peroxisome, plastid | 3.03 | 1.59 |
| Solyc09g059900.1.1 | Tomato | cytosol | 0.76 | 1.52 |
| Solyc09g060020.1.1 | Tomato | cytosol | 0.76 | 1.33 |
| Solyc09g061600.1.1 | Tomato | cytosol | 0.76 | 1.27 |
| Solyc09g082140.2.1 | Tomato | cytosol, nucleus | 3.03 | 1.21 |
| Solyc09g061590.1.1 | Tomato | cytosol | 0.76 | 1.01 |
Protein Annotations
| EnsemblPlants:Solyc09g061490.1.1 | EnsemblPlantsGene:Solyc09g061490.1 | PANTHER:PTHR33345 | UniParc:UPI000276BB4E | UniProt:K4CTY2 | MapMan:35.2 |
Description
No Description!
Coordinates
chr9:+:59286416..59286814
Molecular Weight (calculated)
15073.7 Da
IEP (calculated)
8.155
GRAVY (calculated)
-0.700
Length
132 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVKEEVGES LALVVDNESS STINETGLQV YPVSEYEYGE GLPYAPMNWP NVCDKWGWRT GRRATNSGTF KDIYLYLPVR CQAPKERKKN AFRSKTSVKK
101: YLQSEYPDMD IDQFFASFSW MIPSKQSSSS KG
101: YLQSEYPDMD IDQFFASFSW MIPSKQSSSS KG
001: MSAPIYSPID MQEIVQNPPG FDTEPVPIST YRDNEPVPLS TYRENDSDHL DATQQENDDF WENGFSREEA IEDPEPSQAK ENGKRSVDNS AFTHGETDLN
101: QLPAIPPVST GQGLPYAPVD WPSPGDVWTW RVGRRVTAMG YHQDRFLILP QRLQQKHVPK SFASKPQLAR YLESDFPGMD ADAFFASFSW KVPALFQPAN
201: KVDAASLFEE TPKEVQTEVG QNDENAQDGK GNSRYSQRKR KPMPTPQTYE PVEAKPKSTP RGSSNKKKKG ATTPATGPQS STKPKPSRQS GRRTSIQQRG
301: GAVDLNFLNE EESEPATAPK TSNKRKKRGV NYEEEDVSIP HIYVSPMNGV LAVSHSPIDV NPEEFDSYLN SLDNLMQQPP EEVGRDSSVL VSVSSPMREY
401: EWAEARMKIS SLLEKDFTTL FLSKDAAEIA ALATKLRKDP NLTAEEIVRL KLMEEIPTFS EVFQENKGVI EEADRFFSAL ELNKAKVASL KYEYSDLKEK
501: LGSIQMEVDT NSETIRQIDD QIAQLQARRS ELKRYIGTKE KERVDLSYGQ KMVANSIPKV VQEVQSANLK KPEWECKKDN ALKREAEILS KFTPLKGFFL
101: QLPAIPPVST GQGLPYAPVD WPSPGDVWTW RVGRRVTAMG YHQDRFLILP QRLQQKHVPK SFASKPQLAR YLESDFPGMD ADAFFASFSW KVPALFQPAN
201: KVDAASLFEE TPKEVQTEVG QNDENAQDGK GNSRYSQRKR KPMPTPQTYE PVEAKPKSTP RGSSNKKKKG ATTPATGPQS STKPKPSRQS GRRTSIQQRG
301: GAVDLNFLNE EESEPATAPK TSNKRKKRGV NYEEEDVSIP HIYVSPMNGV LAVSHSPIDV NPEEFDSYLN SLDNLMQQPP EEVGRDSSVL VSVSSPMREY
401: EWAEARMKIS SLLEKDFTTL FLSKDAAEIA ALATKLRKDP NLTAEEIVRL KLMEEIPTFS EVFQENKGVI EEADRFFSAL ELNKAKVASL KYEYSDLKEK
501: LGSIQMEVDT NSETIRQIDD QIAQLQARRS ELKRYIGTKE KERVDLSYGQ KMVANSIPKV VQEVQSANLK KPEWECKKDN ALKREAEILS KFTPLKGFFL
Arabidopsis Description
Spindle assembly abnormal protein [Source:UniProtKB/TrEMBL;Acc:Q9LJ94]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.