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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 1
  • golgi 1
  • plasma membrane 1
  • endoplasmic reticulum 1
  • vacuole 1
  • nucleus 2
  • cytosol 3
  • mitochondrion 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc09g060060.1.1 Tomato cytosol 39.39 65.0
Solyc09g060020.1.1 Tomato cytosol 47.47 62.67
Solyc09g061600.1.1 Tomato cytosol 47.47 59.49
Solyc09g061370.1.1 Tomato cytosol 85.86 43.81
Solyc06g054200.1.1 Tomato cytosol 87.88 39.37
Solyc09g059900.1.1 Tomato cytosol 25.25 37.88
Solyc09g061540.1.1 Tomato cytosol 43.43 37.07
Solyc09g061500.1.1 Tomato cytosol 46.46 36.8
Solyc09g059870.1.1 Tomato cytosol 46.46 35.38
Solyc09g061580.1.1 Tomato cytosol 41.41 35.34
Solyc09g061560.1.1 Tomato mitochondrion 58.59 34.52
Solyc06g054180.1.1 Tomato cytosol 79.8 31.98
Solyc06g054160.1.1 Tomato cytosol, peroxisome, plastid 79.8 31.35
Solyc09g059890.1.1 Tomato cytosol 54.55 24.43
Solyc06g054230.2.1 Tomato cytosol 76.77 23.17
Solyc09g059910.1.1 Tomato extracellular 59.6 22.35
Solyc09g060010.1.1 Tomato extracellular 31.31 20.53
Solyc09g061260.1.1 Tomato cytosol 66.67 19.19
Solyc09g082140.2.1 Tomato cytosol, nucleus 62.63 18.73
Solyc09g059740.1.1 Tomato cytosol 51.52 18.28
CDY10107 Canola cytosol 58.59 12.31
Bra015422.1-P Field mustard cytosol 57.58 12.15
CDY47288 Canola cytosol 57.58 12.1
VIT_05s0020g03600.t01 Wine grape cytosol 57.58 11.54
AT1G05410.1 Thale cress cytosol 54.55 11.46
KRH27646 Soybean cytosol, nucleus 48.48 10.06
KRG99083 Soybean nucleus 49.49 10.06
KRH77849 Soybean nucleus 48.48 10.0
Solyc09g082130.2.1 Tomato nucleus 7.07 1.69
Solyc06g054210.1.1 Tomato nucleus 1.01 0.76
Solyc06g054190.1.1 Tomato cytosol 1.01 0.76
Solyc09g061490.1.1 Tomato nucleus 1.01 0.76
Solyc06g054170.1.1 Tomato cytosol 1.01 0.76
Solyc09g059860.1.1 Tomato cytosol 0.0 0.0
Solyc09g061360.1.1 Tomato nucleus 0.0 0.0
Solyc10g018690.1.1 Tomato cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:Solyc09g061590.1.1EnsemblPlantsGene:Solyc09g061590.1InterPro:Oberon_PHDPANTHER:PTHR33345PANTHER:PTHR33345:SF2PFAM:PF07227
UniParc:UPI000276BB58UniProt:K4CTZ2MapMan:35.2:::
Description
No Description!
Coordinates
chr9:+:59930152..59930520
Molecular Weight (calculated)
10961.4 Da
IEP (calculated)
7.240
GRAVY (calculated)
0.277
Length
99 amino acids
Sequence
(BLAST)
1: METRFCDLCC SESGFCGDCC VVSGHICGHV SHLECALRAY MAGRVRGSIN LYAEYLCRYC DSRMDLVPHA SKILNICTSI ASYADIEKIL NVGIRIMRG
Best Arabidopsis Sequence Match ( AT1G05410.1 )
(BLAST)
001: MDSMDIDQSN IGESPHLLLR PVSPLESGEG LPYAPENWPN PGDTWHWKVG PRISGKGYFV DRYLYPPKYL PGLDTEILRK NKVFRSRLSL QRYIRVHFPE
101: ADVQKFFASF SWSIPCRDGQ GVLPQKQVQL PVYSSDEDPM RDDGSDTAVC KAGNEKCRSL MPQCEAETLP AMPCDICCGE RKFCVDCCCI LCCKLISLEH
201: GGYSYIKCEA VVSEGHICGH VAHMNCALRA YLAGTIGGSM GLDTEYYCRR CDAKKDLFPH VNKFLEICQT VEYQGDVEKI LNLGICILRG AQRDNAKELL
301: NCIESTVIKL KCGTSLEDLW NDDTPTIWSD YSDSGEAREN DTLQSLQDVT PIGPIPFNHE AEMHKLEEEI GEVLRALRKA QEFEYQIAEG KLHAQKECLS
401: DLYRQLEKEK SELSRRVSGT DANSLMTNVL KRLDQIRKEV TKLKEMEEVA KGFGRTPRGV LEEYFHLNIE D
Arabidopsis Description
At1g05410/T25N20_5 [Source:UniProtKB/TrEMBL;Acc:Q8VZE5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.