Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 3
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0878g00030.t01 | Wine grape | cytosol | 47.06 | 86.27 |
| Zm00001d025660_P001 | Maize | plasma membrane, plastid | 65.24 | 58.1 |
| Zm00001d017026_P003 | Maize | cytosol, endoplasmic reticulum, nucleus | 64.17 | 53.1 |
| Zm00001d050915_P004 | Maize | cytosol | 57.22 | 43.15 |
| Zm00001d003588_P002 | Maize | cytosol, extracellular | 31.02 | 38.93 |
| Zm00001d035741_P002 | Maize | cytosol | 37.43 | 34.15 |
| Zm00001d011162_P002 | Maize | plasma membrane | 36.9 | 33.99 |
| Zm00001d010538_P005 | Maize | cytosol | 36.9 | 32.09 |
| Zm00001d038380_P001 | Maize | extracellular, plasma membrane | 36.9 | 32.09 |
| Zm00001d034638_P001 | Maize | cytosol | 36.36 | 31.63 |
| Zm00001d005215_P001 | Maize | cytosol | 21.39 | 26.32 |
| Zm00001d051336_P001 | Maize | plastid | 35.83 | 24.63 |
| Zm00001d003789_P002 | Maize | extracellular, plasma membrane | 33.16 | 23.48 |
| Zm00001d017456_P003 | Maize | cytosol | 36.36 | 16.96 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | UniProt:A0A1D6E8R4 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | ProteinID:ONM16797.1 | ProteinID:ONM16798.1 |
| InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF843 |
| SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase |
| TIGRFAMs:TIGR00231 | UniParc:UPI00084408C4 | EnsemblPlantsGene:Zm00001d003347 | EnsemblPlants:Zm00001d003347_P003 | EnsemblPlants:Zm00001d003347_T003 | SEG:seg |
Description
ras related protein1 ras related protein1
Coordinates
chr2:-:41023077..41025532
Molecular Weight (calculated)
20670.4 Da
IEP (calculated)
9.487
GRAVY (calculated)
0.174
Length
187 amino acids
Sequence
(BLAST)
(BLAST)
001: MSYAYLFKYI IIGDTGVGKS CLLLQFTDKR FQPVHDLTIG VEFGARMINI DNKPIKLQIW DTAGQESFRS ITRSYYRGAA GALLVYDITR HLLRLLEQST
101: RKSKMAFSMY LMRYSPIVKN VICPPGTLVL LSITFCLLTA RILLPAHEYD LIHLLSNSQS YGIKVGYVVP GQSGGAGSSS QGGGCCS
101: RKSKMAFSMY LMRYSPIVKN VICPPGTLVL LSITFCLLTA RILLPAHEYD LIHLLSNSQS YGIKVGYVVP GQSGGAGSSS QGGGCCS
001: MSYAYRFKYI IIGDTGVGKS CLLLKFTDKR FQAVHDLTIG VEFGAKTITI DNKPIKLQIW DTAGQESFRS VTRSYYRGRA GTLLVYDITR RETFNHLASW
101: LEEARQHASE NMTTMLIGNK CDLEDKRTVS TEEGEQFARE HGLIFMEASA KTAHNVEEAF VETAATIYKR IQDGVVDEAN EPGITPGPFG GKDASSSQQR
201: RGCCG
101: LEEARQHASE NMTTMLIGNK CDLEDKRTVS TEEGEQFARE HGLIFMEASA KTAHNVEEAF VETAATIYKR IQDGVVDEAN EPGITPGPFG GKDASSSQQR
201: RGCCG
Arabidopsis Description
RABB1ARABB1a [Source:UniProtKB/TrEMBL;Acc:A0A178UXW9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.