Factsheet for Zm00001d025660_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
golgi 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, plastid
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

extracellular: 20408568
plastid: 22065420
plastid: 23198870
plasma membrane: 23353019
mitochondrion: 27297264
plasma membrane: 27341663

msms PMID: 23353019 doi

D Hopff, S Wienkoop, S Lüthje

University of Hamburg, Biocenter Klein Flottbek and Botanical Garden, Plant Physiology, Ohnhorststraße 18, D-22609 Hamburg, Germany.

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES10970	Sorghum	cytoskeleton, cytosol, endoplasmic reticulum	98.57	98.57
TraesCS2D01G331300.1	Wheat	golgi, plastid	96.19	96.19
TraesCS2B01G350600.1	Wheat	cytosol	96.19	96.19
TraesCS2A01G331600.1	Wheat	cytosol	96.19	96.19
Os04t0470100-01	Rice	plasma membrane	94.76	94.31
Solyc10g007700.2.1	Tomato	plastid	92.86	92.42
Solyc12g011130.1.1	Tomato	cytosol	92.38	91.94
PGSC0003DMT400020113	Potato	cytosol	92.38	91.94
PGSC0003DMT400079822	Potato	cytosol	92.38	91.94
Bra021065.1-P	Field mustard	cytosol	91.43	91.43
CDY58166	Canola	cytosol	91.43	91.43
CDY50126	Canola	cytosol	91.43	91.43
Zm00001d017026_P003	Maize	cytosol, endoplasmic reticulum, nucleus	92.86	86.28
AT4G17160.1	Thale cress	cytosol	79.52	81.46
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular, vacuole	51.9	78.42
Zm00001d050915_P004	Maize	cytosol	86.67	73.39
Zm00001d003347_P003	Maize	cytosol	58.1	65.24
Zm00001d003588_P002	Maize	cytosol, extracellular	34.76	48.99
Zm00001d011162_P002	Maize	plasma membrane	47.14	48.77
Zm00001d035741_P002	Maize	cytosol	43.81	44.88
Zm00001d005215_P001	Maize	cytosol	30.48	42.11
Zm00001d010538_P005	Maize	cytosol	42.38	41.4
Zm00001d038380_P001	Maize	extracellular, plasma membrane	42.38	41.4
Zm00001d034638_P001	Maize	cytosol	42.38	41.4
Zm00001d051336_P001	Maize	plastid	43.81	33.82
Zm00001d003789_P002	Maize	extracellular, plasma membrane	41.43	32.95
Zm00001d017456_P003	Maize	cytosol	44.29	23.19

Protein Annotations

EntrezGene:100127494	MapMan:22.8.1.2	Gene3D:3.40.50.300	ProteinID:AQK44197.1	ProteinID:AQK44198.1	UniProt:B6U232
EMBL:BT068076	EMBL:EU971297	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006810	GO:GO:0008150	GO:GO:0015031	GO:GO:0016020	GO:GO:0016787	GO:GO:0033116
InterPro:P-loop_NTPase	UniProt:P49104	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073
PANTHER:PTHR24073:SF843	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	EMBL:U22433	UniParc:UPI000013316D	EnsemblPlantsGene:Zm00001d025660
EnsemblPlants:Zm00001d025660_P001	EnsemblPlants:Zm00001d025660_T001	SEG:seg	:	:	:

Description

Ras-related protein2 Ras-related protein2

Coordinates

chr10:+:125342471..125344978

Molecular Weight (calculated)

23062.4 Da

IEP (calculated)

7.497

GRAVY (calculated)

-0.204

Length

210 amino acids

Sequence
(BLAST)

001: MSYAYLFKYI IIGDTGVGKS CLLLQFTDKR FQPVHDLTIG VEFGARMITI DNKPIKLQIW DTAGQESFRS ITRSYYRGAA GALLVYDITR RETFNHLASW
101: LEDARQHANA NMTIMLVGNK CDLSHRRAVS YEEGEQFAKE HGLIFMEASA KTAQNVEEAF VKTAGAIYKK IQDGVFDVSN ESYGIKVGYA IPGQSGGAGS
201: SSSQGGGCCS

Best Arabidopsis Sequence Match ( AT4G17170.1 )
(BLAST)

001: MSYAYLFKYI IIGDTGVGKS CLLLQFTDKR FQPVHDLTIG VEFGARMITI DNKPIKLQIW DTAGQESFRS ITRSYYRGAA GALLVYDITR RETFNHLASW
101: LEDARQHANA NMTIMLIGNK CDLAHRRAVS TEEGEQFAKE HGLIFMEASA KTAQNVEEAF IKTAATIYKK IQDGVFDVSN ESYGIKVGYG GIPGPSGGRD
201: GSTSQGGGCC G

Arabidopsis Description

RABB1CRABB1C [Source:UniProtKB/TrEMBL;Acc:A0A178V4V1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.