Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- endoplasmic reticulum 5
- golgi 4
- extracellular 4
- vacuole 4
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g007700.2.1 | Tomato | plastid | 80.58 | 53.08 |
| PGSC0003DMT400079822 | Potato | cytosol | 79.86 | 52.61 |
| GSMUA_Achr9P27910_001 | Banana | plasma membrane | 79.14 | 52.13 |
| PGSC0003DMT400020113 | Potato | cytosol | 79.14 | 52.13 |
| Solyc12g011130.1.1 | Tomato | cytosol | 79.14 | 52.13 |
| Bra021065.1-P | Field mustard | cytosol | 78.42 | 51.9 |
| HORVU6Hr1G051470.1 | Barley | cytosol | 78.42 | 51.9 |
| Os02t0586400-01 | Rice | plasma membrane | 78.42 | 51.9 |
| TraesCS6A01G207100.1 | Wheat | cytosol | 78.42 | 51.9 |
| TraesCS6B01G230400.2 | Wheat | cytosol | 78.42 | 51.9 |
| TraesCS6D01G188500.1 | Wheat | golgi | 78.42 | 51.9 |
| Zm00001d025660_P001 | Maize | plasma membrane, plastid | 78.42 | 51.9 |
| EES05332 | Sorghum | cytosol | 78.42 | 51.9 |
| CDY58166 | Canola | cytosol | 78.42 | 51.9 |
| CDY50126 | Canola | cytosol | 78.42 | 51.9 |
| GSMUA_Achr3P04210_001 | Banana | cytosol | 78.42 | 51.66 |
| EES10970 | Sorghum | cytoskeleton, cytosol, endoplasmic reticulum | 77.7 | 51.43 |
| Os04t0470100-01 | Rice | plasma membrane | 76.98 | 50.71 |
| TraesCS2D01G331300.1 | Wheat | golgi, plastid | 76.26 | 50.48 |
| TraesCS2B01G350600.1 | Wheat | cytosol | 76.26 | 50.48 |
| TraesCS2A01G331600.1 | Wheat | cytosol | 76.26 | 50.48 |
| AT4G17160.1 | Thale cress | cytosol | 71.22 | 48.29 |
| Zm00001d017026_P003 | Maize | cytosol, endoplasmic reticulum, nucleus | 78.42 | 48.23 |
| GSMUA_Achr4P09730_001 | Banana | cytosol | 68.35 | 45.02 |
| GSMUA_Achr4P01720_001 | Banana | endoplasmic reticulum, extracellular | 78.42 | 43.6 |
| Zm00001d050915_P004 | Maize | cytosol | 77.7 | 43.55 |
| GSMUA_Achr8P25750_001 | Banana | cytosol | 69.06 | 43.44 |
| GSMUA_Achr7P24260_001 | Banana | cytosol | 43.88 | 30.2 |
| GSMUA_Achr11P... | Banana | cytosol | 43.17 | 29.56 |
| GSMUA_Achr3P32240_001 | Banana | cytosol | 42.45 | 29.21 |
| GSMUA_Achr2P18340_001 | Banana | plasma membrane | 42.45 | 29.21 |
| GSMUA_Achr8P15030_001 | Banana | cytosol | 41.73 | 28.57 |
| GSMUA_Achr10P... | Banana | cytosol | 41.01 | 28.22 |
| GSMUA_Achr1P04400_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 42.45 | 25.99 |
| GSMUA_Achr10P... | Banana | cytosol | 39.57 | 25.46 |
| GSMUA_Achr10P... | Banana | cytosol | 38.85 | 25.0 |
| GSMUA_Achr9P03220_001 | Banana | cytosol | 38.85 | 25.0 |
| GSMUA_Achr11P... | Banana | cytosol | 38.85 | 25.0 |
| GSMUA_Achr6P34270_001 | Banana | cytosol | 38.85 | 25.0 |
| GSMUA_Achr8P02620_001 | Banana | cytosol | 38.85 | 25.0 |
| GSMUA_AchrUn_... | Banana | cytosol | 38.85 | 25.0 |
| GSMUA_Achr6P17450_001 | Banana | cytosol | 40.29 | 22.22 |
| GSMUA_Achr7P06570_001 | Banana | cytosol | 41.73 | 21.09 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, plastid | 42.45 | 19.6 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | EnsemblPlantsGene:GSMUA_Achr10G03460_001 | EnsemblPlants:GSMUA_Achr10P03460_001 | EnsemblPlants:GSMUA_Achr10T03460_001 |
| UniProt:M0RF23 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 |
| PANTHER:PTHR24073:SF843 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom |
| InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI0002958635 | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G03460_001]
Coordinates
chr10:+:11358926..11367989
Molecular Weight (calculated)
15698.6 Da
IEP (calculated)
4.612
GRAVY (calculated)
-0.118
Length
139 amino acids
Sequence
(BLAST)
(BLAST)
001: MSIILNISFI ILYPINLQIW DTAGQESFRS ITRSYYRGAA GALLVYDITR RETFDHLASW VEDARQHANA TMTIMLIGNK CDSAHTRAVS TEEGEQFAKE
101: HGLIFMEASA KTAQIVEEAF IKTENCCDDT QEIPPGWCF
101: HGLIFMEASA KTAQIVEEAF IKTENCCDDT QEIPPGWCF
001: MSYAYRFKYI IIGDTGVGKS CLLLKFTDKR FQAVHDLTIG VEFGAKTITI DNKPIKLQIW DTAGQESFRS VTRSYYRGRA GTLLVYDITR RETFNHLASW
101: LEEARQHASE NMTTMLIGNK CDLEDKRTVS TEEGEQFARE HGLIFMEASA KTAHNVEEAF VETAATIYKR IQDGVVDEAN EPGITPGPFG GKDASSSQQR
201: RGCCG
101: LEEARQHASE NMTTMLIGNK CDLEDKRTVS TEEGEQFARE HGLIFMEASA KTAHNVEEAF VETAATIYKR IQDGVVDEAN EPGITPGPFG GKDASSSQQR
201: RGCCG
Arabidopsis Description
RABB1ARABB1a [Source:UniProtKB/TrEMBL;Acc:A0A178UXW9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.