Factsheet for GSMUA_Achr1P04400_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:

extracellular 6
endoplasmic reticulum 7
vacuole 5
plasma membrane 6
golgi 6
cytosol 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	endoplasmic reticulum, golgi, mitochondrion, nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s1372g00020.t01	Wine grape	cytosol	82.38	94.44
GSMUA_Achr2P18340_001	Banana	plasma membrane	83.7	94.06
GSMUA_Achr8P15030_001	Banana	cytosol	82.82	92.61
GSMUA_Achr11P...	Banana	cytosol	82.38	92.12
Os01t0179700-01	Rice	plasma membrane	81.5	91.13
Os02t0653800-01	Rice	plasma membrane	81.5	91.13
VIT_16s0013g00520.t01	Wine grape	extracellular	81.5	91.13
KRH57496	Soybean	endoplasmic reticulum	81.06	91.09
TraesCS3A01G056600.1	Wheat	cytosol	81.06	90.64
TraesCS3B01G070300.2	Wheat	cytosol	81.06	90.64
TraesCS3D01G056600.1	Wheat	plastid	81.06	90.64
KRH04201	Soybean	cytosol, extracellular	80.62	90.59
EES07529	Sorghum	cytosol	80.62	90.15
Solyc08g078070.2.1	Tomato	nucleus	80.62	90.15
KRH01059	Soybean	endoplasmic reticulum	80.18	90.1
PGSC0003DMT400034028	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	80.18	89.66
PGSC0003DMT400067463	Potato	cytosol	80.18	89.66
Solyc05g053940.2.1	Tomato	nucleus, plastid, unclear	80.18	89.66
TraesCS3D01G056500.1	Wheat	golgi	80.18	89.66
KRH40178	Soybean	endoplasmic reticulum	79.74	89.6
HORVU3Hr1G010800.8	Barley	cytosol	63.88	88.96
TraesCS3A01G056500.1	Wheat	cytosol	78.85	88.18
KRH66494	Soybean	endoplasmic reticulum	78.85	88.18
AT1G02130.1	Thale cress	cytosol	78.41	87.68
Solyc05g052070.2.1	Tomato	unclear	77.97	87.19
GSMUA_Achr7P24260_001	Banana	cytosol	77.53	87.13
PGSC0003DMT400041326	Potato	cytosol	77.09	86.21
Bra017497.1-P	Field mustard	cytosol	76.65	86.14
Bra022113.1-P	Field mustard	cytosol	76.65	86.14
Bra012658.1-P	Field mustard	cytosol	76.65	86.14
Bra024956.1-P	Field mustard	cytosol	76.21	85.64
TraesCS3A01G056800.1	Wheat	cytosol	70.93	85.19
GSMUA_Achr3P32240_001	Banana	cytosol	75.77	85.15
Solyc01g090170.2.1	Tomato	unclear	75.33	84.24
KRH48822	Soybean	cytosol, endoplasmic reticulum	55.07	79.11
CDY38055	Canola	cytosol	79.3	75.95
GSMUA_Achr10P...	Banana	cytosol	65.2	73.27
TraesCS3A01G056900.1	Wheat	mitochondrion	51.98	70.66
Zm00001d051336_P001	Maize	plastid	81.06	67.65
GSMUA_Achr7P06570_001	Banana	cytosol	81.94	67.64
HORVU3Hr1G010780.1	Barley	plasma membrane	81.06	65.95
Bra040162.1-P	Field mustard	cytosol	78.85	65.33
GSMUA_Achr11P...	Banana	endoplasmic reticulum, plastid	83.26	62.79
VIT_15s0021g01410.t01	Wine grape	cytosol	56.39	62.44
TraesCS3A01G056700.1	Wheat	cytosol	68.72	61.18
GSMUA_Achr6P17450_001	Banana	cytosol	67.4	60.71
GSMUA_AchrUn_...	Banana	cytosol	53.3	56.02
GSMUA_Achr11P...	Banana	cytosol	52.86	55.56
GSMUA_Achr9P03220_001	Banana	cytosol	52.86	55.56
GSMUA_Achr6P34270_001	Banana	cytosol	52.42	55.09
GSMUA_Achr10P...	Banana	cytosol	52.42	55.09
GSMUA_Achr8P02620_001	Banana	cytosol	51.98	54.63
GSMUA_Achr10P...	Banana	cytosol	51.1	53.7
Zm00001d017456_P003	Maize	cytosol	80.62	45.64
GSMUA_Achr9P27910_001	Banana	plasma membrane	42.29	45.5
GSMUA_Achr3P04210_001	Banana	cytosol	41.41	44.55
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular, vacuole	25.99	42.45
GSMUA_Achr4P09730_001	Banana	cytosol	37.89	40.76
GSMUA_Achr8P25750_001	Banana	cytosol	36.12	37.1
GSMUA_Achr4P01720_001	Banana	endoplasmic reticulum, extracellular	40.09	36.4

Protein Annotations

MapMan:22.8.1.4	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr1G04400_001	EnsemblPlants:GSMUA_Achr1P04400_001	EnsemblPlants:GSMUA_Achr1T04400_001
UniProt:M0RWZ8	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073
PANTHER:PTHR24073:SF666	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SMART:SM00177
SUPFAM:SSF52540	SignalP:SignalP-noTM	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI0002958248

Description

GTP-binding protein YPTM2 [Source:GMGC_GENE;Acc:GSMUA_Achr1G04400_001]

Coordinates

chr1:-:3683885..3688281

Molecular Weight (calculated)

25228.2 Da

IEP (calculated)

5.971

GRAVY (calculated)

-0.050

Length

227 amino acids

Sequence
(BLAST)

001: MLASTVGRLV IYCALIVKCI SCYCQITEVD YLFKLLLIGD SGVGKSCLLL RFADDSYLES YISTIGVDFK IRTVEQDGKT IKLQIWDTAG QERFRTITSS
101: YYRGAHGIII VYDVTDQESF NNVKQWLNEI DRYASDSVNK LLVGNKCDLT ANRVVSYETA KAFADEIGIP FMETSAKNAT NVEQAFMAMT ADIKNRMASQ
201: PAMNSARPPT VQIRGQPVSQ NTSCCSS

Best Arabidopsis Sequence Match ( AT1G02130.1 )
(BLAST)

001: MNPEYDYLFK LLLIGDSGVG KSCLLLRFSD DSYVESYIST IGVDFKIRTV EQDGKTIKLQ IWDTAGQERF RTITSSYYRG AHGIIIVYDV TDEESFNNVK
101: QWLSEIDRYA SDNVNKLLVG NKSDLTENRA IPYETAKAFA DEIGIPFMET SAKDATNVEQ AFMAMSASIK ERMASQPAGN NARPPTVQIR GQPVAQKNGC
201: CST

Arabidopsis Description

RABD2ARas-related protein RABD2a [Source:UniProtKB/Swiss-Prot;Acc:P28188]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.