Factsheet for GSMUA_Achr8P15030_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1
endoplasmic reticulum 3
golgi 3
extracellular 2
vacuole 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	endoplasmic reticulum, golgi, mitochondrion, nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P18340_001	Banana	plasma membrane	94.09	94.55
VIT_00s1372g00020.t01	Wine grape	cytosol	91.63	93.94
GSMUA_Achr11P...	Banana	cytosol	93.1	93.1
Solyc08g078070.2.1	Tomato	nucleus	92.12	92.12
KRH57496	Soybean	endoplasmic reticulum	91.63	92.08
KRH04201	Soybean	cytosol, extracellular	91.63	92.08
PGSC0003DMT400034028	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	91.63	91.63
PGSC0003DMT400067463	Potato	cytosol	91.63	91.63
Solyc05g053940.2.1	Tomato	nucleus, plastid, unclear	91.63	91.63
Os02t0653800-01	Rice	plasma membrane	91.13	91.13
Os01t0179700-01	Rice	plasma membrane	91.13	91.13
TraesCS3A01G056600.1	Wheat	cytosol	90.64	90.64
TraesCS3B01G070300.2	Wheat	cytosol	90.64	90.64
TraesCS3D01G056600.1	Wheat	plastid	90.64	90.64
VIT_16s0013g00520.t01	Wine grape	extracellular	90.64	90.64
EES07529	Sorghum	cytosol	90.64	90.64
KRH01059	Soybean	endoplasmic reticulum	89.66	90.1
TraesCS3D01G056500.1	Wheat	golgi	89.66	89.66
KRH40178	Soybean	endoplasmic reticulum	89.16	89.6
GSMUA_Achr7P24260_001	Banana	cytosol	89.16	89.6
KRH66494	Soybean	endoplasmic reticulum	89.16	89.16
Bra017497.1-P	Field mustard	cytosol	88.67	89.11
Bra022113.1-P	Field mustard	cytosol	88.67	89.11
Bra012658.1-P	Field mustard	cytosol	88.18	88.61
Bra024956.1-P	Field mustard	cytosol	88.18	88.61
TraesCS3A01G056500.1	Wheat	cytosol	88.18	88.18
AT1G02130.1	Thale cress	cytosol	87.68	87.68
Solyc05g052070.2.1	Tomato	unclear	87.19	87.19
GSMUA_Achr3P32240_001	Banana	cytosol	86.7	87.13
PGSC0003DMT400041326	Potato	cytosol	86.7	86.7
HORVU3Hr1G010800.8	Barley	cytosol	69.46	86.5
Solyc01g090170.2.1	Tomato	unclear	85.22	85.22
TraesCS3A01G056800.1	Wheat	cytosol	77.34	83.07
GSMUA_Achr1P04400_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	92.61	82.82
KRH48822	Soybean	cytosol, endoplasmic reticulum	61.08	78.48
CDY38055	Canola	cytosol	88.18	75.53
GSMUA_Achr10P...	Banana	cytosol	72.91	73.27
TraesCS3A01G056900.1	Wheat	mitochondrion	57.14	69.46
GSMUA_Achr7P06570_001	Banana	cytosol	92.12	68.0
Zm00001d051336_P001	Maize	plastid	88.18	65.81
HORVU3Hr1G010780.1	Barley	plasma membrane	90.15	65.59
Bra040162.1-P	Field mustard	cytosol	87.19	64.6
VIT_15s0021g01410.t01	Wine grape	cytosol	64.53	63.9
GSMUA_Achr11P...	Banana	endoplasmic reticulum, plastid	94.09	63.46
GSMUA_Achr6P17450_001	Banana	cytosol	75.37	60.71
TraesCS3A01G056700.1	Wheat	cytosol	74.88	59.61
GSMUA_Achr9P03220_001	Banana	cytosol	60.59	56.94
GSMUA_Achr6P34270_001	Banana	cytosol	60.59	56.94
GSMUA_Achr11P...	Banana	cytosol	60.59	56.94
GSMUA_AchrUn_...	Banana	cytosol	60.1	56.48
GSMUA_Achr10P...	Banana	cytosol	60.1	56.48
GSMUA_Achr8P02620_001	Banana	cytosol	59.11	55.56
GSMUA_Achr10P...	Banana	cytosol	58.62	55.09
GSMUA_Achr9P27910_001	Banana	plasma membrane	47.29	45.5
Zm00001d017456_P003	Maize	cytosol	88.67	44.89
GSMUA_Achr3P04210_001	Banana	cytosol	46.31	44.55
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular, vacuole	28.57	41.73
GSMUA_Achr4P09730_001	Banana	cytosol	41.87	40.28
GSMUA_Achr8P25750_001	Banana	cytosol	39.9	36.65
GSMUA_Achr4P01720_001	Banana	endoplasmic reticulum, extracellular	43.84	35.6

Protein Annotations

MapMan:22.8.1.4	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr8G15030_001	EnsemblPlants:GSMUA_Achr8P15030_001	EnsemblPlants:GSMUA_Achr8T15030_001
UniProt:M0TQK6	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073
PANTHER:PTHR24073:SF666	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SMART:SM00177
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI00029677BD	:

Description

GTP-binding protein YPTM2 [Source:GMGC_GENE;Acc:GSMUA_Achr8G15030_001]

Coordinates

chr8:+:12550623..12560171

Molecular Weight (calculated)

22647.8 Da

IEP (calculated)

6.515

GRAVY (calculated)

-0.264

Length

203 amino acids

Sequence
(BLAST)

001: MNPEYDYLFK LLLIGDSGVG KSCLLLRFAD DSYLESYIST IGVDFKIRTV EHDGKTIKLQ IWDTAGQERF RTITSSYYRG AHGIIVVYDV TDQESFNNVK
101: QWLNEIDRYA SDNVNKLLVG NKCDLTANRV VSFETAKAFA DEIGIPFLET SAKNATNVQQ AFMAMTAAIK NRMASQPAMN SARPSTVQIR GQPVDQKSSC
201: CSS

Best Arabidopsis Sequence Match ( AT1G02130.1 )
(BLAST)

001: MNPEYDYLFK LLLIGDSGVG KSCLLLRFSD DSYVESYIST IGVDFKIRTV EQDGKTIKLQ IWDTAGQERF RTITSSYYRG AHGIIIVYDV TDEESFNNVK
101: QWLSEIDRYA SDNVNKLLVG NKSDLTENRA IPYETAKAFA DEIGIPFMET SAKDATNVEQ AFMAMSASIK ERMASQPAGN NARPPTVQIR GQPVAQKNGC
201: CST

Arabidopsis Description

RABD2ARas-related protein RABD2a [Source:UniProtKB/Swiss-Prot;Acc:P28188]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.