Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 4
- cytosol 3
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
cytosol:
21379583
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH57496 | Soybean | endoplasmic reticulum | 96.97 | 95.05 |
| KRH04201 | Soybean | cytosol, extracellular | 96.46 | 94.55 |
| VIT_16s0013g00520.t01 | Wine grape | extracellular | 95.96 | 93.6 |
| GSMUA_Achr2P18340_001 | Banana | plasma membrane | 95.45 | 93.56 |
| Solyc08g078070.2.1 | Tomato | nucleus | 95.45 | 93.1 |
| PGSC0003DMT400067463 | Potato | cytosol | 94.95 | 92.61 |
| GSMUA_Achr11P... | Banana | cytosol | 94.44 | 92.12 |
| GSMUA_Achr8P15030_001 | Banana | cytosol | 93.94 | 91.63 |
| Os01t0179700-01 | Rice | plasma membrane | 93.43 | 91.13 |
| Os02t0653800-01 | Rice | plasma membrane | 93.43 | 91.13 |
| EES07529 | Sorghum | cytosol | 92.42 | 90.15 |
| TraesCS3D01G056500.1 | Wheat | golgi | 91.41 | 89.16 |
| TraesCS3B01G070300.2 | Wheat | cytosol | 91.41 | 89.16 |
| TraesCS3A01G056600.1 | Wheat | cytosol | 91.41 | 89.16 |
| TraesCS3D01G056600.1 | Wheat | plastid | 91.41 | 89.16 |
| HORVU3Hr1G010800.8 | Barley | cytosol | 73.23 | 88.96 |
| Bra022113.1-P | Field mustard | cytosol | 90.4 | 88.61 |
| Bra017497.1-P | Field mustard | cytosol | 90.4 | 88.61 |
| Bra024956.1-P | Field mustard | cytosol | 89.9 | 88.12 |
| TraesCS3A01G056500.1 | Wheat | cytosol | 89.9 | 87.68 |
| Bra012658.1-P | Field mustard | cytosol | 89.39 | 87.62 |
| AT1G02130.1 | Thale cress | cytosol | 89.39 | 87.19 |
| TraesCS3A01G056800.1 | Wheat | cytosol | 80.3 | 84.13 |
| GSMUA_Achr1P04400_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 94.44 | 82.38 |
| VIT_12s0035g01150.t01 | Wine grape | vacuole | 77.78 | 76.24 |
| CDY38055 | Canola | cytosol | 89.9 | 75.11 |
| TraesCS3A01G056900.1 | Wheat | mitochondrion | 58.59 | 69.46 |
| GSMUA_Achr7P06570_001 | Banana | cytosol | 93.43 | 67.27 |
| Zm00001d051336_P001 | Maize | plastid | 91.92 | 66.91 |
| Bra040162.1-P | Field mustard | cytosol | 90.4 | 65.33 |
| HORVU3Hr1G010780.1 | Barley | plasma membrane | 91.41 | 64.87 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, plastid | 95.45 | 62.79 |
| VIT_15s0021g01410.t01 | Wine grape | cytosol | 64.65 | 62.44 |
| TraesCS3A01G056700.1 | Wheat | cytosol | 78.79 | 61.18 |
| VIT_13s0019g00520.t01 | Wine grape | extracellular | 62.63 | 57.41 |
| VIT_06s0004g04200.t01 | Wine grape | cytosol | 62.12 | 56.94 |
| VIT_08s0007g04750.t01 | Wine grape | cytosol | 61.62 | 56.48 |
| VIT_08s0040g02490.t01 | Wine grape | cytosol | 60.61 | 55.56 |
| VIT_00s0878g00030.t01 | Wine grape | cytosol | 27.27 | 52.94 |
| Zm00001d017456_P003 | Maize | cytosol | 92.42 | 45.64 |
| VIT_14s0066g00180.t01 | Wine grape | cytosol | 47.98 | 45.45 |
| VIT_12s0057g01470.t01 | Wine grape | extracellular | 47.98 | 45.02 |
| VIT_00s1506g00010.t01 | Wine grape | cytosol | 30.81 | 40.94 |
| VIT_00s0455g00010.t01 | Wine grape | cytosol | 18.69 | 27.82 |
Protein Annotations
| EntrezGene:100248422 | wikigene:100248422 | MapMan:22.8.1.4 | Gene3D:3.40.50.300 | ProteinID:CBI23542 | ProteinID:CBI23542.3 |
| UniProt:D7SZ58 | EMBL:FN595324 | GO:GO:0000139 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 | GO:GO:0005794 | GO:GO:0006810 | GO:GO:0006888 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016787 | EntrezGene:LOC100248422 | wikigene:LOC100248422 | InterPro:P-loop_NTPase |
| PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF666 | SMART:SM00173 |
| SMART:SM00174 | SMART:SM00175 | SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase |
| TIGR:TC53125 | TIGRFAMs:TIGR00231 | UniParc:UPI0001BE25AE | ArrayExpress:VIT_00s1372g00020 | EnsemblPlantsGene:VIT_00s1372g00020 | EnsemblPlants:VIT_00s1372g00020.t01 |
| RefSeq:XP_002265463 | RefSeq:XP_002265463.2 | : | : | : | : |
Description
No Description!
Coordinates
chrUn:-:38878550..38881143
Molecular Weight (calculated)
22046.2 Da
IEP (calculated)
5.979
GRAVY (calculated)
-0.274
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: DYLFKLLLIG DSGVGKSCLL LRFADDSYLE SYISTIGVDF KIRTVEQDGK TIKLQIWDTA GQERFRTITS SYYRGAHGII VVYDVTDQES FNNVKQWLNE
101: IDRYASENVN KLLVGNKCDL TANKVVSYET AKAFADEIGI PFMETSAKNA TNVEQAFMAM AAEIKNRMAS QPAMNTARPP TVQIRGQPVN QKSGCCSS
101: IDRYASENVN KLLVGNKCDL TANKVVSYET AKAFADEIGI PFMETSAKNA TNVEQAFMAM AAEIKNRMAS QPAMNTARPP TVQIRGQPVN QKSGCCSS
001: MNPEYDYLFK LLLIGDSGVG KSCLLLRFSD DSYVESYIST IGVDFKIRTV EQDGKTIKLQ IWDTAGQERF RTITSSYYRG AHGIIIVYDV TDEESFNNVK
101: QWLSEIDRYA SDNVNKLLVG NKSDLTENRA IPYETAKAFA DEIGIPFMET SAKDATNVEQ AFMAMSASIK ERMASQPAGN NARPPTVQIR GQPVAQKNGC
201: CST
101: QWLSEIDRYA SDNVNKLLVG NKSDLTENRA IPYETAKAFA DEIGIPFMET SAKDATNVEQ AFMAMSASIK ERMASQPAGN NARPPTVQIR GQPVAQKNGC
201: CST
Arabidopsis Description
RABD2ARas-related protein RABD2a [Source:UniProtKB/Swiss-Prot;Acc:P28188]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.