CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
golgi 3
endoplasmic reticulum 3
mitochondrion 1
extracellular 2
plasma membrane 2
vacuole 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	endoplasmic reticulum, golgi, mitochondrion, nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0653800-01	Rice	plasma membrane	98.52	98.52
Os01t0179700-01	Rice	plasma membrane	98.03	98.03
TraesCS3D01G056500.1	Wheat	golgi	93.1	93.1
GSMUA_Achr2P18340_001	Banana	plasma membrane	92.61	93.07
KRH04201	Soybean	cytosol, extracellular	92.61	93.07
KRH57496	Soybean	endoplasmic reticulum	92.61	93.07
TraesCS3D01G056600.1	Wheat	plastid	92.61	92.61
TraesCS3B01G070300.2	Wheat	cytosol	92.61	92.61
TraesCS3A01G056600.1	Wheat	cytosol	92.61	92.61
Solyc08g078070.2.1	Tomato	nucleus	92.61	92.61
VIT_00s1372g00020.t01	Wine grape	cytosol	90.15	92.42
VIT_16s0013g00520.t01	Wine grape	extracellular	92.12	92.12
PGSC0003DMT400067463	Potato	cytosol	92.12	92.12
TraesCS3A01G056500.1	Wheat	cytosol	91.63	91.63
KRH01059	Soybean	endoplasmic reticulum	91.13	91.58
GSMUA_Achr8P15030_001	Banana	cytosol	90.64	90.64
GSMUA_Achr11P...	Banana	cytosol	90.15	90.15
KRH40178	Soybean	endoplasmic reticulum	89.66	90.1
HORVU3Hr1G010800.8	Barley	cytosol	71.92	89.57
AT1G02130.1	Thale cress	cytosol	89.16	89.16
Solyc05g052070.2.1	Tomato	unclear	89.16	89.16
Bra024956.1-P	Field mustard	cytosol	88.67	89.11
Bra022113.1-P	Field mustard	cytosol	88.67	89.11
Bra017497.1-P	Field mustard	cytosol	88.67	89.11
Bra012658.1-P	Field mustard	cytosol	88.67	89.11
KRH66494	Soybean	endoplasmic reticulum	88.67	88.67
PGSC0003DMT400041326	Potato	cytosol	88.18	88.18
Solyc05g053940.2.1	Tomato	nucleus, plastid, unclear	87.19	87.19
PGSC0003DMT400034028	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	87.19	87.19
EES03124	Sorghum	cytosol	85.71	85.71
TraesCS3A01G056800.1	Wheat	cytosol	79.31	85.19
Solyc01g090170.2.1	Tomato	unclear	81.77	81.77
GSMUA_Achr1P04400_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	90.15	80.62
KRH48822	Soybean	cytosol, endoplasmic reticulum	60.1	77.22
CDY38055	Canola	cytosol	88.67	75.95
EES18842	Sorghum	cytosol	75.86	75.12
Zm00001d051336_P001	Maize	plastid	97.54	72.79
TraesCS3A01G056900.1	Wheat	mitochondrion	58.62	71.26
EES10859	Sorghum	cytosol	72.41	71.01
HORVU3Hr1G010780.1	Barley	plasma membrane	93.1	67.74
GSMUA_Achr7P06570_001	Banana	cytosol	89.66	66.18
Bra040162.1-P	Field mustard	cytosol	86.7	64.23
VIT_15s0021g01410.t01	Wine grape	cytosol	62.56	61.95
TraesCS3A01G056700.1	Wheat	cytosol	77.34	61.57
GSMUA_Achr11P...	Banana	endoplasmic reticulum, plastid	91.13	61.46
EER93195	Sorghum	cytosol	61.58	58.41
EES19652	Sorghum	cytosol	61.08	57.67
EER98157	Sorghum	cytosol	60.59	56.94
OQU88745	Sorghum	cytosol	62.07	55.75
Zm00001d017456_P003	Maize	cytosol	98.03	49.63
EES10970	Sorghum	cytoskeleton, cytosol, endoplasmic reticulum	46.8	45.24
EES05332	Sorghum	cytosol	45.81	44.29

Protein Annotations

MapMan:22.8.1.4	Gene3D:3.40.50.300	EntrezGene:8073972	UniProt:C5XS07	EnsemblPlants:EES07529	ProteinID:EES07529
ProteinID:EES07529.1	GO:GO:0000139	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0005783	GO:GO:0005789	GO:GO:0005794	GO:GO:0005886	GO:GO:0006810
GO:GO:0006888	GO:GO:0008150	GO:GO:0016020	GO:GO:0016787	GO:GO:0032588	GO:GO:0046686
InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF666
SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SMART:SM00177	EnsemblPlantsGene:SORBI_3004G297700
SUPFAM:SSF52540	unigene:Sbi.521	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI00017B647D
RefSeq:XP_002454553.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:63707372..63711196

Molecular Weight (calculated)

22477.6 Da

IEP (calculated)

5.326

GRAVY (calculated)

-0.278

Length

203 amino acids

Sequence
(BLAST)

001: MNPEYDYLFK LLLIGDSGVG KSCLLLRFAD DSYLDSYIST IGVDFKIRTV EQDGKTIKLQ IWDTAGQERF RTITSSYYRG AHGIIIVYDV TDQESFNNVK
101: QWLNEIDRYA SDNVNKLLVG NKSDLTANKV VATETAKAFA DEMGIPFMET SAKNATNVEQ AFMAMAASIK DRMASQPAAA NARPATVQIR GQPVNQKTSC
201: CSS

Best Arabidopsis Sequence Match ( AT1G02130.1 )
(BLAST)

001: MNPEYDYLFK LLLIGDSGVG KSCLLLRFSD DSYVESYIST IGVDFKIRTV EQDGKTIKLQ IWDTAGQERF RTITSSYYRG AHGIIIVYDV TDEESFNNVK
101: QWLSEIDRYA SDNVNKLLVG NKSDLTENRA IPYETAKAFA DEIGIPFMET SAKDATNVEQ AFMAMSASIK ERMASQPAGN NARPPTVQIR GQPVAQKNGC
201: CST

Arabidopsis Description

RABD2ARas-related protein RABD2a [Source:UniProtKB/Swiss-Prot;Acc:P28188]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.