Factsheet for GSMUA_Achr11P17660_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1
endoplasmic reticulum 3
golgi 3
extracellular 2
vacuole 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	endoplasmic reticulum, golgi, mitochondrion, nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P18340_001	Banana	plasma membrane	95.07	95.54
VIT_00s1372g00020.t01	Wine grape	cytosol	92.12	94.44
GSMUA_Achr8P15030_001	Banana	cytosol	93.1	93.1
KRH57496	Soybean	endoplasmic reticulum	92.61	93.07
Solyc08g078070.2.1	Tomato	nucleus	92.61	92.61
KRH04201	Soybean	cytosol, extracellular	92.12	92.57
PGSC0003DMT400034028	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	92.12	92.12
PGSC0003DMT400067463	Potato	cytosol	92.12	92.12
Solyc05g053940.2.1	Tomato	nucleus, plastid, unclear	92.12	92.12
VIT_16s0013g00520.t01	Wine grape	extracellular	91.63	91.63
Os02t0653800-01	Rice	plasma membrane	91.13	91.13
Os01t0179700-01	Rice	plasma membrane	91.13	91.13
EES07529	Sorghum	cytosol	90.15	90.15
Bra012658.1-P	Field mustard	cytosol	89.16	89.6
KRH01059	Soybean	endoplasmic reticulum	89.16	89.6
Bra017497.1-P	Field mustard	cytosol	89.16	89.6
Bra022113.1-P	Field mustard	cytosol	89.16	89.6
TraesCS3A01G056600.1	Wheat	cytosol	89.16	89.16
TraesCS3D01G056600.1	Wheat	plastid	89.16	89.16
TraesCS3B01G070300.2	Wheat	cytosol	89.16	89.16
Solyc05g052070.2.1	Tomato	unclear	89.16	89.16
Bra024956.1-P	Field mustard	cytosol	88.67	89.11
KRH40178	Soybean	endoplasmic reticulum	88.67	89.11
PGSC0003DMT400041326	Potato	cytosol	88.67	88.67
KRH66494	Soybean	endoplasmic reticulum	88.67	88.67
TraesCS3D01G056500.1	Wheat	golgi	88.18	88.18
GSMUA_Achr7P24260_001	Banana	cytosol	87.19	87.62
AT1G02130.1	Thale cress	cytosol	87.19	87.19
TraesCS3A01G056500.1	Wheat	cytosol	86.7	86.7
HORVU3Hr1G010800.8	Barley	cytosol	68.97	85.89
GSMUA_Achr3P32240_001	Banana	cytosol	85.22	85.64
Solyc01g090170.2.1	Tomato	unclear	84.73	84.73
GSMUA_Achr1P04400_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	92.12	82.38
TraesCS3A01G056800.1	Wheat	cytosol	75.86	81.48
KRH48822	Soybean	cytosol, endoplasmic reticulum	62.07	79.75
CDY38055	Canola	cytosol	87.68	75.11
GSMUA_Achr10P...	Banana	cytosol	71.43	71.78
GSMUA_Achr7P06570_001	Banana	cytosol	92.61	68.36
TraesCS3A01G056900.1	Wheat	mitochondrion	55.66	67.66
Zm00001d051336_P001	Maize	plastid	87.68	65.44
GSMUA_Achr11P...	Banana	endoplasmic reticulum, plastid	96.06	64.78
Bra040162.1-P	Field mustard	cytosol	86.7	64.23
HORVU3Hr1G010780.1	Barley	plasma membrane	88.18	64.16
VIT_15s0021g01410.t01	Wine grape	cytosol	62.56	61.95
TraesCS3A01G056700.1	Wheat	cytosol	75.37	60.0
GSMUA_Achr6P17450_001	Banana	cytosol	73.89	59.52
GSMUA_AchrUn_...	Banana	cytosol	60.1	56.48
GSMUA_Achr11P...	Banana	cytosol	60.1	56.48
GSMUA_Achr6P34270_001	Banana	cytosol	60.1	56.48
GSMUA_Achr9P03220_001	Banana	cytosol	60.1	56.48
GSMUA_Achr10P...	Banana	cytosol	59.61	56.02
GSMUA_Achr8P02620_001	Banana	cytosol	59.11	55.56
GSMUA_Achr10P...	Banana	cytosol	58.13	54.63
GSMUA_Achr9P27910_001	Banana	plasma membrane	47.29	45.5
Zm00001d017456_P003	Maize	cytosol	88.18	44.64
GSMUA_Achr3P04210_001	Banana	cytosol	46.31	44.55
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular, vacuole	29.56	43.17
GSMUA_Achr4P09730_001	Banana	cytosol	42.36	40.76
GSMUA_Achr8P25750_001	Banana	cytosol	39.9	36.65
GSMUA_Achr4P01720_001	Banana	endoplasmic reticulum, extracellular	43.84	35.6

Protein Annotations

MapMan:22.8.1.4	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr11G17660_001	EnsemblPlants:GSMUA_Achr11P17660_001	EnsemblPlants:GSMUA_Achr11T17660_001
UniProt:M0RT46	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073
PANTHER:PTHR24073:SF666	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SMART:SM00177
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI000294DAA8	:

Description

GTP-binding protein YPTM2 [Source:GMGC_GENE;Acc:GSMUA_Achr11G17660_001]

Coordinates

chr11:-:19237544..19241011

Molecular Weight (calculated)

22521.7 Da

IEP (calculated)

5.974

GRAVY (calculated)

-0.256

Length

203 amino acids

Sequence
(BLAST)

001: MNPEYDYLFK LLLIGDSGVG KSCLLLRFAD DSYLESYIST IGVDFKIRTV EQDGKTIKLQ IWDTAGQERF RTITSSYYRG AHGIIVVYDV TDQESFNNVK
101: QWLNEIDRYA SDSVNKLLVG NKCDLTANKV VSYETAKAFA DEIGIPFMEA SAKNATNVEQ AFMAMTGAIK NRMASQPALN SAKPPAVQIR GQPVNQKSTC
201: CSS

Best Arabidopsis Sequence Match ( AT4G17530.1 )
(BLAST)

001: MNPEYDYLFK LLLIGDSGVG KSCLLLRFAD DSYLDSYIST IGVDFKIRTV EQDGKTIKLQ IWDTAGQERF RTITSSYYRG AHGIIVTYDV TDLESFNNVK
101: QWLNEIDRYA SENVNKLLVG NKCDLTSQKV VSTETAKAFA DELGIPFLET SAKNATNVEE AFMAMTAAIK TRMASQPAGG SKPPTVQIRG QPVNQQSGCC
201: SS

Arabidopsis Description

RABD2CRAB1C [Source:UniProtKB/TrEMBL;Acc:A0A178USY3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.