Factsheet for GSMUA_Achr8P25750_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
endoplasmic reticulum 1
golgi 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P27910_001	Banana	plasma membrane	68.33	71.56
GSMUA_Achr3P04210_001	Banana	cytosol	67.42	70.62
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular, vacuole	43.44	69.06
GSMUA_Achr4P09730_001	Banana	cytosol	58.37	61.14
GSMUA_Achr4P01720_001	Banana	endoplasmic reticulum, extracellular	65.61	58.0
GSMUA_Achr7P24260_001	Banana	cytosol	38.01	41.58
GSMUA_Achr3P32240_001	Banana	cytosol	37.1	40.59
GSMUA_Achr11P...	Banana	cytosol	36.65	39.9
GSMUA_Achr8P15030_001	Banana	cytosol	36.65	39.9
GSMUA_Achr2P18340_001	Banana	plasma membrane	36.2	39.6
GSMUA_Achr10P...	Banana	cytosol	33.48	36.63
GSMUA_Achr1P04400_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	37.1	36.12
GSMUA_Achr10P...	Banana	cytosol	33.48	34.26
GSMUA_Achr10P...	Banana	cytosol	33.03	33.8
GSMUA_Achr9P03220_001	Banana	cytosol	33.03	33.8
GSMUA_Achr8P02620_001	Banana	cytosol	33.03	33.8
GSMUA_Achr6P34270_001	Banana	cytosol	33.03	33.8
GSMUA_Achr11P...	Banana	cytosol	33.03	33.8
GSMUA_AchrUn_...	Banana	cytosol	32.58	33.33
GSMUA_Achr6P17450_001	Banana	cytosol	36.2	31.75
GSMUA_Achr7P06570_001	Banana	cytosol	36.2	29.09
GSMUA_Achr11P...	Banana	endoplasmic reticulum, plastid	36.2	26.58

Protein Annotations

MapMan:22.8.1.2	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr8G25750_001	EnsemblPlants:GSMUA_Achr8P25750_001	EnsemblPlants:GSMUA_Achr8T25750_001
UniProt:M0TTM8	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073
PANTHER:PTHR24073:SF843	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI000295AED3	:	:

Description

Ras-related protein Rab-2-B [Source:GMGC_GENE;Acc:GSMUA_Achr8G25750_001]

Coordinates

chr8:-:29523546..29526290

Molecular Weight (calculated)

24710.2 Da

IEP (calculated)

6.293

GRAVY (calculated)

-0.441

Length

221 amino acids

Sequence
(BLAST)

001: MEMPRPSTLK YIIIGDTGVG KSSLLLQFTE KRFQPANGST TNVEFAAKMI TINNEPIKLK IWDTVGQETF RSITRSYYRD SAGALLVYDI TRRETFNHLA
101: SWLEDLSEHA GANVTIMLIG NKCDLARRRA VSTEEGEQFA EDHGLYFMET SAKTAQNVEE AFINTAAAIR ENIEDRGSDV LDEFLQDARK VGYEPVRLSK
201: WERVPKGGRK VSSSKAGGCC S

Best Arabidopsis Sequence Match ( AT4G17170.1 )
(BLAST)

001: MSYAYLFKYI IIGDTGVGKS CLLLQFTDKR FQPVHDLTIG VEFGARMITI DNKPIKLQIW DTAGQESFRS ITRSYYRGAA GALLVYDITR RETFNHLASW
101: LEDARQHANA NMTIMLIGNK CDLAHRRAVS TEEGEQFAKE HGLIFMEASA KTAQNVEEAF IKTAATIYKK IQDGVFDVSN ESYGIKVGYG GIPGPSGGRD
201: GSTSQGGGCC G

Arabidopsis Description

RABB1CRABB1C [Source:UniProtKB/TrEMBL;Acc:A0A178V4V1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.