Factsheet for GSMUA_Achr7P06570_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 2
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	endoplasmic reticulum, golgi, mitochondrion, nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57496	Soybean	endoplasmic reticulum	68.73	93.56
VIT_00s1372g00020.t01	Wine grape	cytosol	67.27	93.43
KRH04201	Soybean	cytosol, extracellular	68.36	93.07
GSMUA_Achr11P...	Banana	cytosol	68.36	92.61
GSMUA_Achr8P15030_001	Banana	cytosol	68.0	92.12
GSMUA_Achr2P18340_001	Banana	plasma membrane	67.64	92.08
VIT_16s0013g00520.t01	Wine grape	extracellular	67.27	91.13
Os01t0179700-01	Rice	plasma membrane	66.91	90.64
Os02t0653800-01	Rice	plasma membrane	66.91	90.64
Solyc08g078070.2.1	Tomato	nucleus	66.55	90.15
Bra017497.1-P	Field mustard	cytosol	66.18	90.1
Bra022113.1-P	Field mustard	cytosol	66.18	90.1
EES07529	Sorghum	cytosol	66.18	89.66
PGSC0003DMT400067463	Potato	cytosol	66.18	89.66
Bra024956.1-P	Field mustard	cytosol	65.82	89.6
Bra012658.1-P	Field mustard	cytosol	65.45	89.11
TraesCS3A01G056600.1	Wheat	cytosol	65.45	88.67
TraesCS3D01G056600.1	Wheat	plastid	65.45	88.67
TraesCS3D01G056500.1	Wheat	golgi	65.45	88.67
Solyc05g053940.2.1	Tomato	nucleus, plastid, unclear	65.45	88.67
PGSC0003DMT400034028	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	65.45	88.67
TraesCS3B01G070300.2	Wheat	cytosol	65.45	88.67
Solyc05g052070.2.1	Tomato	unclear	65.09	88.18
KRH01059	Soybean	endoplasmic reticulum	64.73	88.12
PGSC0003DMT400041326	Potato	cytosol	64.73	87.68
KRH40178	Soybean	endoplasmic reticulum	64.36	87.62
TraesCS3A01G056500.1	Wheat	cytosol	64.36	87.19
KRH66494	Soybean	endoplasmic reticulum	64.0	86.7
GSMUA_Achr7P24260_001	Banana	cytosol	63.64	86.63
HORVU3Hr1G010800.8	Barley	cytosol	50.91	85.89
AT1G02130.1	Thale cress	cytosol	62.91	85.22
GSMUA_Achr3P32240_001	Banana	cytosol	62.55	85.15
Solyc01g090170.2.1	Tomato	unclear	61.82	83.74
GSMUA_Achr1P04400_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	67.64	81.94
TraesCS3A01G056800.1	Wheat	cytosol	55.64	80.95
KRH48822	Soybean	cytosol, endoplasmic reticulum	44.0	76.58
CDY38055	Canola	cytosol	64.0	74.26
GSMUA_Achr10P...	Banana	cytosol	53.09	72.28
HORVU3Hr1G010780.1	Barley	plasma membrane	69.09	68.1
GSMUA_Achr11P...	Banana	endoplasmic reticulum, plastid	74.18	67.77
TraesCS3A01G056900.1	Wheat	mitochondrion	41.09	67.66
Bra040162.1-P	Field mustard	cytosol	66.18	66.42
Zm00001d051336_P001	Maize	plastid	65.45	66.18
VIT_15s0021g01410.t01	Wine grape	cytosol	45.45	60.98
GSMUA_Achr6P17450_001	Banana	cytosol	55.64	60.71
TraesCS3A01G056700.1	Wheat	cytosol	56.0	60.39
GSMUA_Achr11P...	Banana	cytosol	43.64	55.56
GSMUA_Achr6P34270_001	Banana	cytosol	43.64	55.56
GSMUA_Achr9P03220_001	Banana	cytosol	43.64	55.56
GSMUA_Achr8P02620_001	Banana	cytosol	43.27	55.09
GSMUA_Achr10P...	Banana	cytosol	43.27	55.09
GSMUA_AchrUn_...	Banana	cytosol	42.91	54.63
GSMUA_Achr10P...	Banana	cytosol	41.82	53.24
GSMUA_Achr9P27910_001	Banana	plasma membrane	35.27	45.97
Zm00001d017456_P003	Maize	cytosol	66.55	45.64
GSMUA_Achr3P04210_001	Banana	cytosol	34.91	45.5
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular, vacuole	21.09	41.73
GSMUA_Achr4P09730_001	Banana	cytosol	30.18	39.34
GSMUA_Achr8P25750_001	Banana	cytosol	29.09	36.2
GSMUA_Achr4P01720_001	Banana	endoplasmic reticulum, extracellular	32.73	36.0

Protein Annotations

MapMan:22.8.1.4	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr7G06570_001	EnsemblPlants:GSMUA_Achr7P06570_001	EnsemblPlants:GSMUA_Achr7T06570_001
UniProt:M0TF97	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073
PANTHER:PTHR24073:SF666	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SMART:SM00177
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI000296A8C8	SEG:seg

Description

GTP-binding protein YPTM2 [Source:GMGC_GENE;Acc:GSMUA_Achr7G06570_001]

Coordinates

chr7:+:4819267..4824631

Molecular Weight (calculated)

30091.8 Da

IEP (calculated)

7.895

GRAVY (calculated)

-0.176

Length

275 amino acids

Sequence
(BLAST)

001: MSLVRGKDVT SIIVNGTIIA IINGTTEGVV SSRSFPYLSS PSVTREGRGG EEGREGKGSV FARLTSFFLQ PAMNPEYDYL FKLLLIGDSG VGKSCLLLRF
101: ADDSYLDSYI STIGVDFKIR TVELDGKTVK LQIWDTAGQE RFRTITSSYY RGAHGIIVVY DVTDQESFNN VKQWLNEIDR YASENVNKLL VGNKCDLTAN
201: KVVSYETAKA FADEIGVPFL EASAKNATNV EQAFMAMTAA IKNKMASQPG MNGARPPTVQ IRGQPVNQKT TCCSS

Best Arabidopsis Sequence Match ( AT4G17530.1 )
(BLAST)

001: MNPEYDYLFK LLLIGDSGVG KSCLLLRFAD DSYLDSYIST IGVDFKIRTV EQDGKTIKLQ IWDTAGQERF RTITSSYYRG AHGIIVTYDV TDLESFNNVK
101: QWLNEIDRYA SENVNKLLVG NKCDLTSQKV VSTETAKAFA DELGIPFLET SAKNATNVEE AFMAMTAAIK TRMASQPAGG SKPPTVQIRG QPVNQQSGCC
201: SS

Arabidopsis Description

RABD2CRAB1C [Source:UniProtKB/TrEMBL;Acc:A0A178USY3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.