Factsheet for GSMUA_Achr11P00680_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid

Predictor Summary:

nucleus 2
cytosol 2
extracellular 3
endoplasmic reticulum 5
vacuole 3
plasma membrane 3
golgi 4
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum, golgi, mitochondrion, nucleus
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	64.78	96.06
GSMUA_Achr2P18340_001	Banana	plasma membrane	64.12	95.54
VIT_00s1372g00020.t01	Wine grape	cytosol	62.79	95.45
GSMUA_Achr8P15030_001	Banana	cytosol	63.46	94.09
KRH57496	Soybean	endoplasmic reticulum	62.79	93.56
Solyc08g078070.2.1	Tomato	nucleus	62.79	93.1
KRH04201	Soybean	cytosol, extracellular	62.46	93.07
PGSC0003DMT400067463	Potato	cytosol	62.46	92.61
VIT_16s0013g00520.t01	Wine grape	extracellular	62.13	92.12
Os02t0653800-01	Rice	plasma membrane	62.13	92.12
Os01t0179700-01	Rice	plasma membrane	62.13	92.12
Solyc05g053940.2.1	Tomato	nucleus, plastid, unclear	61.46	91.13
EES07529	Sorghum	cytosol	61.46	91.13
PGSC0003DMT400034028	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	61.46	91.13
Bra022113.1-P	Field mustard	cytosol	60.8	90.59
Bra017497.1-P	Field mustard	cytosol	60.8	90.59
TraesCS3D01G056600.1	Wheat	plastid	60.8	90.15
TraesCS3B01G070300.2	Wheat	cytosol	60.8	90.15
TraesCS3A01G056600.1	Wheat	cytosol	60.8	90.15
Bra024956.1-P	Field mustard	cytosol	60.47	90.1
KRH01059	Soybean	endoplasmic reticulum	60.47	90.1
Solyc05g052070.2.1	Tomato	unclear	60.47	89.66
KRH40178	Soybean	endoplasmic reticulum	60.13	89.6
Bra012658.1-P	Field mustard	cytosol	60.13	89.6
PGSC0003DMT400041326	Potato	cytosol	60.13	89.16
TraesCS3D01G056500.1	Wheat	golgi	60.13	89.16
KRH66494	Soybean	endoplasmic reticulum	60.13	89.16
GSMUA_Achr7P24260_001	Banana	cytosol	59.8	89.11
TraesCS3A01G056500.1	Wheat	cytosol	59.14	87.68
AT1G02130.1	Thale cress	cytosol	59.14	87.68
HORVU3Hr1G010800.8	Barley	cytosol	47.18	87.12
GSMUA_Achr3P32240_001	Banana	cytosol	58.14	86.63
Solyc01g090170.2.1	Tomato	unclear	57.14	84.73
GSMUA_Achr1P04400_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	62.79	83.26
TraesCS3A01G056800.1	Wheat	cytosol	51.83	82.54
KRH48822	Soybean	cytosol, endoplasmic reticulum	41.86	79.75
CDY38055	Canola	cytosol	60.8	77.22
GSMUA_Achr7P06570_001	Banana	cytosol	67.77	74.18
GSMUA_Achr10P...	Banana	cytosol	49.17	73.27
TraesCS3A01G056900.1	Wheat	mitochondrion	38.21	68.86
HORVU3Hr1G010780.1	Barley	plasma membrane	62.46	67.38
Bra040162.1-P	Field mustard	cytosol	61.13	67.15
Zm00001d051336_P001	Maize	plastid	59.8	66.18
VIT_15s0021g01410.t01	Wine grape	cytosol	42.86	62.93
TraesCS3A01G056700.1	Wheat	cytosol	52.49	61.96
GSMUA_Achr6P17450_001	Banana	cytosol	51.16	61.11
GSMUA_Achr9P03220_001	Banana	cytosol	40.86	56.94
GSMUA_Achr6P34270_001	Banana	cytosol	40.86	56.94
GSMUA_Achr11P...	Banana	cytosol	40.86	56.94
GSMUA_AchrUn_...	Banana	cytosol	40.53	56.48
GSMUA_Achr10P...	Banana	cytosol	40.53	56.48
GSMUA_Achr8P02620_001	Banana	cytosol	39.87	55.56
GSMUA_Achr10P...	Banana	cytosol	39.53	55.09
GSMUA_Achr9P27910_001	Banana	plasma membrane	32.23	45.97
Zm00001d017456_P003	Maize	cytosol	60.8	45.64
GSMUA_Achr3P04210_001	Banana	cytosol	31.56	45.02
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular, vacuole	19.6	42.45
GSMUA_Achr4P09730_001	Banana	cytosol	28.57	40.76
GSMUA_Achr8P25750_001	Banana	cytosol	26.58	36.2
GSMUA_Achr4P01720_001	Banana	endoplasmic reticulum, extracellular	29.9	36.0

Protein Annotations

MapMan:22.8.1.4	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
EnsemblPlantsGene:GSMUA_Achr11G00680_001	EnsemblPlants:GSMUA_Achr11P00680_001	EnsemblPlants:GSMUA_Achr11T00680_001	UniProt:M0RN99	InterPro:P-loop_NTPase	PFAM:PF00071
PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF666	SMART:SM00173	SMART:SM00174
SMART:SM00175	SMART:SM00176	SMART:SM00177	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase
TIGRFAMs:TIGR00231	TMHMM:TMhelix	UniParc:UPI000296683C	SEG:seg	:	:

Description

GTP-binding protein YPTM2 [Source:GMGC_GENE;Acc:GSMUA_Achr11G00680_001]

Coordinates

chr11:-:418575..423477

Molecular Weight (calculated)

33438.0 Da

IEP (calculated)

8.756

GRAVY (calculated)

-0.174

Length

301 amino acids

Sequence
(BLAST)

001: MGFGMITAVH YNAVSASCAV LTSTLCIAVF PFLFSRNSLS SVLSRSRFDL FVRLLGVLET LVEEEQGIHR LRLRNRFKNP AGEERSRRRS TSPPSASAMN
101: PEYDYLFKLL LIGDSGVGKS CLLLRFADDS YLESYISTIG VDFKIRTVEQ DGKTVKLQIW DTAGQERFRT ITSSYYRGAH GIIVVYDVTD QESFNNVKQW
201: LNEIDRYASD NVNKLLVGNK CDLTANKVVS YETAKAFADE IGIPFMEASA KNATNVEQAF MAMTAAIKNR MASQPAMNGA KPPTVQIRGQ PLNQKSSCCS
301: S

Best Arabidopsis Sequence Match ( AT4G17530.1 )
(BLAST)

001: MNPEYDYLFK LLLIGDSGVG KSCLLLRFAD DSYLDSYIST IGVDFKIRTV EQDGKTIKLQ IWDTAGQERF RTITSSYYRG AHGIIVTYDV TDLESFNNVK
101: QWLNEIDRYA SENVNKLLVG NKCDLTSQKV VSTETAKAFA DELGIPFLET SAKNATNVEE AFMAMTAAIK TRMASQPAGG SKPPTVQIRG QPVNQQSGCC
201: SS

Arabidopsis Description

RABD2CRAB1C [Source:UniProtKB/TrEMBL;Acc:A0A178USY3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.