Factsheet for TraesCS3A01G056900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G010800.8	Barley	cytosol	72.46	74.23
TraesCS3A01G056800.1	Wheat	cytosol	74.25	65.61
TraesCS3A01G056600.1	Wheat	cytosol	78.44	64.53
TraesCS3D01G056600.1	Wheat	plastid	78.44	64.53
TraesCS3B01G070300.2	Wheat	cytosol	78.44	64.53
KRH48822	Soybean	cytosol, endoplasmic reticulum	58.68	62.03
TraesCS3A01G056500.1	Wheat	cytosol	74.25	61.08
Os01t0179700-01	Rice	plasma membrane	71.26	58.62
EES07529	Sorghum	cytosol	71.26	58.62
Os02t0653800-01	Rice	plasma membrane	71.26	58.62
VIT_00s1372g00020.t01	Wine grape	cytosol	69.46	58.59
GSMUA_Achr2P18340_001	Banana	plasma membrane	70.66	58.42
VIT_16s0013g00520.t01	Wine grape	extracellular	70.66	58.13
KRH57496	Soybean	endoplasmic reticulum	70.06	57.92
KRH01059	Soybean	endoplasmic reticulum	69.46	57.43
KRH04201	Soybean	cytosol, extracellular	69.46	57.43
AT1G02130.1	Thale cress	cytosol	69.46	57.14
GSMUA_Achr8P15030_001	Banana	cytosol	69.46	57.14
KRH40178	Soybean	endoplasmic reticulum	68.86	56.93
KRH66494	Soybean	endoplasmic reticulum	68.86	56.65
Solyc08g078070.2.1	Tomato	nucleus	68.86	56.65
PGSC0003DMT400034028	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	68.26	56.16
PGSC0003DMT400067463	Potato	cytosol	68.26	56.16
Solyc05g053940.2.1	Tomato	nucleus, plastid, unclear	68.26	56.16
GSMUA_Achr11P...	Banana	cytosol	67.66	55.66
Solyc05g052070.2.1	Tomato	unclear	67.66	55.66
PGSC0003DMT400041326	Potato	cytosol	67.07	55.17
Bra024956.1-P	Field mustard	cytosol	65.87	54.46
TraesCS3A01G203100.1	Wheat	plastid	65.87	54.19
Bra012658.1-P	Field mustard	cytosol	65.27	53.96
Bra017497.1-P	Field mustard	cytosol	65.27	53.96
Bra022113.1-P	Field mustard	cytosol	65.27	53.96
Solyc01g090170.2.1	Tomato	unclear	64.67	53.2
GSMUA_Achr1P04400_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	70.66	51.98
CDY38055	Canola	cytosol	68.86	48.52
TraesCS1A01G015300.1	Wheat	cytosol, extracellular	56.29	45.85
TraesCS3A01G056700.1	Wheat	cytosol	65.87	43.14
Zm00001d051336_P001	Maize	plastid	70.06	43.01
TraesCS2A01G311000.3	Wheat	cytosol	53.29	41.78
GSMUA_Achr7P06570_001	Banana	cytosol	67.66	41.09
Bra040162.1-P	Field mustard	cytosol	64.67	39.42
VIT_15s0021g01410.t01	Wine grape	cytosol	47.9	39.02
GSMUA_Achr11P...	Banana	endoplasmic reticulum, plastid	68.86	38.21
TraesCS1A01G286200.1	Wheat	cytosol	45.51	35.51
TraesCS3A01G356000.3	Wheat	plastid	45.51	35.19
TraesCS5A01G476400.1	Wheat	cytosol	43.11	33.64
Zm00001d017456_P003	Maize	cytosol	71.26	29.68
TraesCS6A01G207100.1	Wheat	cytosol	36.53	29.05
TraesCS5A01G256000.1	Wheat	cytosol	35.33	28.78
TraesCS2A01G331600.1	Wheat	cytosol	35.93	28.57
TraesCS3A01G489900.1	Wheat	cytosol	28.74	26.82

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449
PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF666	SMART:SM00173	SMART:SM00174	SMART:SM00175
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	EnsemblPlantsGene:TraesCS3A01G056900	EnsemblPlants:TraesCS3A01G056900.1

Description

No Description!

Coordinates

chr3A:+:32863884..32864815

Molecular Weight (calculated)

18891.3 Da

IEP (calculated)

7.655

GRAVY (calculated)

-0.424

Length

167 amino acids

Sequence
(BLAST)

001: MATKSSYRGY LMQLRHDMWA HLLHRGFPLL PTTTFPNYNY QWDTAGQERF KTITSSYYRG AHGIIIVYDV TDQDSFNNVK QWLNEIDCYG SENVNKLLVG
101: NKSDLTDKRV VSYETAKAFA DEIGIPFMET SAKNALNVEQ AFMAMSASIK DRMASQPAAN SARPATV

Best Arabidopsis Sequence Match ( AT1G02130.1 )
(BLAST)

001: MNPEYDYLFK LLLIGDSGVG KSCLLLRFSD DSYVESYIST IGVDFKIRTV EQDGKTIKLQ IWDTAGQERF RTITSSYYRG AHGIIIVYDV TDEESFNNVK
101: QWLSEIDRYA SDNVNKLLVG NKSDLTENRA IPYETAKAFA DEIGIPFMET SAKDATNVEQ AFMAMSASIK ERMASQPAGN NARPPTVQIR GQPVAQKNGC
201: CST

Arabidopsis Description

RABD2ARas-related protein RABD2a [Source:UniProtKB/Swiss-Prot;Acc:P28188]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.