Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G327900.1 | Wheat | cytosol | 96.24 | 99.51 |
| TraesCS2D01G309200.2 | Wheat | cytosol | 99.06 | 99.06 |
| EES10859 | Sorghum | cytosol | 86.85 | 89.37 |
| Zm00001d003588_P002 | Maize | cytosol, extracellular | 61.97 | 88.59 |
| Zm00001d005215_P001 | Maize | cytosol | 56.81 | 79.61 |
| VIT_12s0035g01150.t01 | Wine grape | vacuole | 74.18 | 78.22 |
| GSMUA_Achr10P... | Banana | cytosol | 73.24 | 77.23 |
| KRH06045 | Soybean | cytosol | 72.3 | 76.62 |
| PGSC0003DMT400064019 | Potato | cytosol, extracellular | 72.3 | 76.24 |
| Solyc01g103370.2.1 | Tomato | endoplasmic reticulum | 72.3 | 76.24 |
| KRH26285 | Soybean | endoplasmic reticulum | 71.83 | 76.12 |
| TraesCS1A01G015300.1 | Wheat | cytosol, extracellular | 72.77 | 75.61 |
| CDY56593 | Canola | cytosol | 71.36 | 73.79 |
| CDX73855 | Canola | cytosol | 71.36 | 73.79 |
| AT3G11730.1 | Thale cress | cytosol | 70.89 | 73.66 |
| CDY47919 | Canola | vacuole | 70.89 | 73.3 |
| Bra001418.1-P | Field mustard | cytosol, extracellular | 70.89 | 73.3 |
| Bra038676.1-P | Field mustard | vacuole | 70.89 | 73.3 |
| TraesCS3A01G203100.1 | Wheat | plastid | 69.01 | 72.41 |
| TraesCS3A01G056500.1 | Wheat | cytosol | 67.61 | 70.94 |
| TraesCS3A01G056600.1 | Wheat | cytosol | 67.61 | 70.94 |
| TraesCS3A01G056800.1 | Wheat | cytosol | 57.75 | 65.08 |
| Zm00001d003789_P002 | Maize | extracellular, plasma membrane | 78.87 | 63.64 |
| GSMUA_Achr6P17450_001 | Banana | cytosol | 74.18 | 62.7 |
| TraesCS3A01G056900.1 | Wheat | mitochondrion | 41.78 | 53.29 |
| TraesCS3A01G056700.1 | Wheat | cytosol | 62.44 | 52.16 |
| TraesCS3A01G356000.3 | Wheat | plastid | 52.11 | 51.39 |
| TraesCS5A01G476400.1 | Wheat | cytosol | 51.17 | 50.93 |
| TraesCS1A01G286200.1 | Wheat | cytosol | 51.17 | 50.93 |
| TraesCS2A01G331600.1 | Wheat | cytosol | 42.72 | 43.33 |
| TraesCS6A01G207100.1 | Wheat | cytosol | 42.25 | 42.86 |
| TraesCS5A01G256000.1 | Wheat | cytosol | 38.97 | 40.49 |
| TraesCS3A01G489900.1 | Wheat | cytosol | 31.92 | 37.99 |
Protein Annotations
| MapMan:22.8.1.4 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 |
| PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF827 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 |
| SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | EnsemblPlantsGene:TraesCS2A01G311000 |
| EnsemblPlants:TraesCS2A01G311000.3 | TIGR:cd01869 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2A:+:534623808..534625394
Molecular Weight (calculated)
23896.6 Da
IEP (calculated)
6.269
GRAVY (calculated)
-0.235
Length
213 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNEFDYLFK LLLIGDSSVG KSCFLLRFSD DSYVDSYIST IGVDFKIRTL EMDGKTIKLQ IYLLHLQQWD TAGQERFRTI TSSYYRGAHG IIIVYDITDM
101: ESFNNVKQWL SEIDKYANDS VRKLLVGNKC DLAESRVVDT AVAQACADEM GIPFLETSAK ESINVEEAFL AMSAAIKKSK AGGLERKASN LVQMKGQPIQ
201: QQQHKQKSSC CST
101: ESFNNVKQWL SEIDKYANDS VRKLLVGNKC DLAESRVVDT AVAQACADEM GIPFLETSAK ESINVEEAFL AMSAAIKKSK AGGLERKASN LVQMKGQPIQ
201: QQQHKQKSSC CST
001: MNPEYDYLFK LLLIGDSGVG KSCLLLRFSD DSYVESYIST IGVDFKIRTV EQDGKTIKLQ IWDTAGQERF RTITSSYYRG AHGIIIVYDV TDEESFNNVK
101: QWLSEIDRYA SDNVNKLLVG NKSDLTENRA IPYETAKAFA DEIGIPFMET SAKDATNVEQ AFMAMSASIK ERMASQPAGN NARPPTVQIR GQPVAQKNGC
201: CST
101: QWLSEIDRYA SDNVNKLLVG NKSDLTENRA IPYETAKAFA DEIGIPFMET SAKDATNVEQ AFMAMSASIK ERMASQPAGN NARPPTVQIR GQPVAQKNGC
201: CST
Arabidopsis Description
RABD2ARas-related protein RABD2a [Source:UniProtKB/Swiss-Prot;Acc:P28188]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.