Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY56593 | Canola | cytosol | 98.05 | 97.57 |
| CDX73855 | Canola | cytosol | 98.05 | 97.57 |
| Bra001418.1-P | Field mustard | cytosol, extracellular | 97.56 | 97.09 |
| CDY47919 | Canola | vacuole | 94.15 | 93.69 |
| Bra038676.1-P | Field mustard | vacuole | 94.15 | 93.69 |
| VIT_12s0035g01150.t01 | Wine grape | vacuole | 85.85 | 87.13 |
| Solyc01g103370.2.1 | Tomato | endoplasmic reticulum | 84.88 | 86.14 |
| PGSC0003DMT400064019 | Potato | cytosol, extracellular | 84.88 | 86.14 |
| KRH06045 | Soybean | cytosol | 82.44 | 84.08 |
| KRH26285 | Soybean | endoplasmic reticulum | 81.46 | 83.08 |
| GSMUA_Achr10P... | Banana | cytosol | 77.56 | 78.71 |
| Zm00001d003588_P002 | Maize | cytosol, extracellular | 56.1 | 77.18 |
| TraesCS1A01G015300.1 | Wheat | cytosol, extracellular | 76.1 | 76.1 |
| TraesCS1B01G019100.2 | Wheat | golgi | 76.1 | 76.1 |
| TraesCS1D01G013200.1 | Wheat | cytosol, extracellular | 75.61 | 75.98 |
| AT5G47200.1 | Thale cress | cytosol | 74.15 | 75.25 |
| AT4G17530.1 | Thale cress | cytosol | 74.15 | 75.25 |
| Zm00001d035741_P002 | Maize | cytosol | 74.63 | 74.63 |
| EES10859 | Sorghum | cytosol | 74.63 | 73.91 |
| EES18842 | Sorghum | cytosol | 73.66 | 73.66 |
| TraesCS2B01G327900.1 | Wheat | cytosol | 73.66 | 73.3 |
| AT1G02130.1 | Thale cress | cytosol | 71.71 | 72.41 |
| TraesCS2A01G311000.3 | Wheat | cytosol | 73.66 | 70.89 |
| TraesCS2D01G309200.2 | Wheat | cytosol | 73.17 | 70.42 |
| HORVU1Hr1G001910.9 | Barley | endoplasmic reticulum | 74.63 | 68.0 |
| GSMUA_Achr6P17450_001 | Banana | cytosol | 78.54 | 63.89 |
| Zm00001d005215_P001 | Maize | cytosol | 46.34 | 62.5 |
| AT3G46060.1 | Thale cress | cytosol | 57.56 | 54.63 |
| AT5G59840.1 | Thale cress | cytosol | 57.56 | 54.63 |
| AT3G53610.3 | Thale cress | cytosol | 56.59 | 53.7 |
| AT3G09900.1 | Thale cress | cytosol | 56.59 | 53.21 |
| Zm00001d003789_P002 | Maize | extracellular, plasma membrane | 68.29 | 53.03 |
| AT5G03520.1 | Thale cress | cytosol | 55.12 | 52.31 |
| AT4G17170.1 | Thale cress | cytosol | 48.29 | 46.92 |
| AT4G17160.1 | Thale cress | cytosol | 46.83 | 46.83 |
| AT4G35860.1 | Thale cress | cytosol | 46.83 | 45.5 |
Protein Annotations
| MapMan:22.8.1.4 | Gene3D:3.40.50.300 | EntrezGene:820345 | UniProt:A0A178VII7 | ProteinID:AAF23189.1 | ProteinID:AEE75090.1 |
| EMBL:AK118150 | ArrayExpress:AT3G11730 | EnsemblPlantsGene:AT3G11730 | RefSeq:AT3G11730 | TAIR:AT3G11730 | RefSeq:AT3G11730-TAIR-G |
| EnsemblPlants:AT3G11730.1 | TAIR:AT3G11730.1 | Symbol:ATFP8 | EMBL:BT005576 | GO:GO:0000139 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005525 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005886 |
| GO:GO:0006810 | GO:GO:0006888 | GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016192 |
| GO:GO:0016787 | GO:GO:0030742 | GO:GO:0032588 | GO:GO:0080115 | RefSeq:NP_187779.1 | ProteinID:OAP04702.1 |
| InterPro:P-loop_NTPase | PFAM:PF00071 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0005052 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00449 | PFscan:PS51419 |
| PANTHER:PTHR24073 | PANTHER:PTHR24073:SF845 | UniProt:Q9ZRE2 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 |
| SMART:SM00176 | SMART:SM00177 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 |
| EMBL:U64911 | UniParc:UPI000000C6B7 | : | : | : | : |
Description
RABD1Ras-related protein RABD1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZRE2]
Coordinates
chr3:-:3709131..3711617
Molecular Weight (calculated)
22726.0 Da
IEP (calculated)
4.897
GRAVY (calculated)
-0.307
Length
205 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNEYDYLFK LLLIGDSSVG KSCLLLRFAD DAYIDSYIST IGVDFKIRTI EQDGKTIKLQ IWDTAGQERF RTITSSYYRG AHGIIIVYDC TEMESFNNVK
101: QWLSEIDRYA NESVCKLLIG NKNDMVESKV VSTETGRALA DELGIPFLET SAKDSINVEQ AFLTIAGEIK KKMGSQTNAN KTSGPGTVQM KGQPIQQNNG
201: GCCGQ
101: QWLSEIDRYA NESVCKLLIG NKNDMVESKV VSTETGRALA DELGIPFLET SAKDSINVEQ AFLTIAGEIK KKMGSQTNAN KTSGPGTVQM KGQPIQQNNG
201: GCCGQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.