Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 2
- endoplasmic reticulum 3
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42961 | Canola | cytosol | 99.05 | 99.05 |
| CDY35596 | Canola | cytosol | 99.05 | 99.05 |
| Bra026231.1-P | Field mustard | cytosol | 99.05 | 99.05 |
| CDY09641 | Canola | cytosol | 98.58 | 98.58 |
| KRH36659 | Soybean | cytosol | 97.16 | 97.16 |
| KRH11646 | Soybean | endoplasmic reticulum | 97.16 | 97.16 |
| AT4G35860.1 | Thale cress | cytosol | 87.2 | 87.2 |
| AT4G17160.1 | Thale cress | cytosol | 81.52 | 83.9 |
| TraesCS3D01G495900.1 | Wheat | cytosol | 58.29 | 68.72 |
| TraesCS3A01G489900.1 | Wheat | cytosol | 57.82 | 68.16 |
| TraesCS3B01G547700.1 | Wheat | plastid | 53.08 | 53.85 |
| VIT_00s0455g00010.t01 | Wine grape | cytosol | 33.18 | 52.63 |
| AT3G11730.1 | Thale cress | cytosol | 46.92 | 48.29 |
| AT4G17530.1 | Thale cress | cytosol | 45.02 | 47.03 |
| AT1G02130.1 | Thale cress | cytosol | 45.02 | 46.8 |
| AT5G47200.1 | Thale cress | cytosol | 44.55 | 46.53 |
| AT5G59840.1 | Thale cress | cytosol | 43.6 | 42.59 |
| AT3G53610.3 | Thale cress | cytosol | 43.13 | 42.13 |
| AT3G46060.1 | Thale cress | cytosol | 43.13 | 42.13 |
| AT5G03520.1 | Thale cress | cytosol | 41.23 | 40.28 |
| AT3G09900.1 | Thale cress | cytosol | 41.23 | 39.91 |
Protein Annotations
| MapMan:22.8.1.2 | Gene3D:3.40.50.300 | EntrezGene:827428 | UniProt:A0A178V4V1 | ProteinID:AEE83857.1 | Symbol:AT-RAB2 |
| ArrayExpress:AT4G17170 | EnsemblPlantsGene:AT4G17170 | RefSeq:AT4G17170 | TAIR:AT4G17170 | RefSeq:AT4G17170-TAIR-G | EnsemblPlants:AT4G17170.1 |
| TAIR:AT4G17170.1 | EMBL:BT002513 | EMBL:BT006251 | ProteinID:CAB45962.1 | ProteinID:CAB80988.1 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005768 | GO:GO:0005773 | GO:GO:0005886 |
| GO:GO:0006810 | GO:GO:0006888 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015031 | GO:GO:0016020 |
| GO:GO:0016043 | GO:GO:0016787 | GO:GO:0030100 | RefSeq:NP_193450.1 | ProteinID:OAP00678.1 | InterPro:P-loop_NTPase |
| UniProt:P92963 | PFAM:PF00071 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005052 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 |
| PANTHER:PTHR24073:SF597 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 | SUPFAM:SSF52540 |
| InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI00000AC2D1 | EMBL:Y09314 | SEG:seg |
Description
RABB1CRABB1C [Source:UniProtKB/TrEMBL;Acc:A0A178V4V1]
Coordinates
chr4:-:9644574..9646408
Molecular Weight (calculated)
23165.6 Da
IEP (calculated)
7.498
GRAVY (calculated)
-0.230
Length
211 amino acids
Sequence
(BLAST)
(BLAST)
001: MSYAYLFKYI IIGDTGVGKS CLLLQFTDKR FQPVHDLTIG VEFGARMITI DNKPIKLQIW DTAGQESFRS ITRSYYRGAA GALLVYDITR RETFNHLASW
101: LEDARQHANA NMTIMLIGNK CDLAHRRAVS TEEGEQFAKE HGLIFMEASA KTAQNVEEAF IKTAATIYKK IQDGVFDVSN ESYGIKVGYG GIPGPSGGRD
201: GSTSQGGGCC G
101: LEDARQHANA NMTIMLIGNK CDLAHRRAVS TEEGEQFAKE HGLIFMEASA KTAQNVEEAF IKTAATIYKK IQDGVFDVSN ESYGIKVGYG GIPGPSGGRD
201: GSTSQGGGCC G
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.