Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G17530.1 | Thale cress | cytosol | 99.01 | 99.01 |
| CDY43436 | Canola | cytosol | 98.51 | 98.51 |
| CDY40564 | Canola | cytosol | 98.51 | 98.51 |
| CDY33521 | Canola | cytosol | 98.51 | 98.51 |
| CDY28967 | Canola | cytosol | 98.51 | 98.51 |
| CDX77748 | Canola | cytosol | 98.51 | 98.51 |
| Bra017497.1-P | Field mustard | cytosol | 98.51 | 98.51 |
| Bra022113.1-P | Field mustard | cytosol | 98.51 | 98.51 |
| Bra024956.1-P | Field mustard | cytosol | 98.51 | 98.51 |
| CDY67887 | Canola | cytosol | 98.51 | 98.03 |
| CDX85225 | Canola | cytosol | 71.78 | 91.77 |
| AT1G02130.1 | Thale cress | cytosol | 84.65 | 84.24 |
| AT3G11730.1 | Thale cress | cytosol | 75.25 | 74.15 |
| AT5G59840.1 | Thale cress | cytosol | 61.88 | 57.87 |
| AT3G46060.1 | Thale cress | cytosol | 61.88 | 57.87 |
| AT5G03520.1 | Thale cress | cytosol | 60.4 | 56.48 |
| AT3G53610.3 | Thale cress | cytosol | 59.41 | 55.56 |
| AT3G09900.1 | Thale cress | cytosol | 59.41 | 55.05 |
| AT4G17160.1 | Thale cress | cytosol | 48.02 | 47.32 |
| AT4G35860.1 | Thale cress | cytosol | 47.52 | 45.5 |
| AT4G17170.1 | Thale cress | cytosol | 46.53 | 44.55 |
Protein Annotations
| MapMan:22.8.1.4 | Gene3D:3.40.50.300 | EntrezGene:834766 | UniProt:A0A178UEE0 | ProteinID:AED95483.1 | EMBL:AF324990 |
| EMBL:AK227103 | ArrayExpress:AT5G47200 | EnsemblPlantsGene:AT5G47200 | RefSeq:AT5G47200 | TAIR:AT5G47200 | RefSeq:AT5G47200-TAIR-G |
| EnsemblPlants:AT5G47200.1 | TAIR:AT5G47200.1 | Symbol:ATRABD2B | EMBL:AY080753 | EMBL:AY085384 | EMBL:AY114013 |
| Unigene:At.24811 | ProteinID:BAA97153.1 | EMBL:BT023739 | EMBL:BT025777 | GO:GO:0000003 | GO:GO:0000139 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 |
| GO:GO:0005794 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006888 | GO:GO:0008150 | GO:GO:0009653 |
| GO:GO:0009856 | GO:GO:0009860 | GO:GO:0009987 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016043 |
| GO:GO:0016049 | GO:GO:0016192 | GO:GO:0016787 | GO:GO:0030154 | GO:GO:0040007 | RefSeq:NP_568678.1 |
| ProteinID:OAO91472.1 | InterPro:P-loop_NTPase | PFAM:PF00071 | PO:PO:0000013 | PO:PO:0000035 | PO:PO:0000036 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0009073 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00449 | PFscan:PS51419 |
| PANTHER:PTHR24073 | PANTHER:PTHR24073:SF666 | UniProt:Q9FPJ4 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 |
| SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI00000AA7BA |
Description
RABD2BRas-related protein RABD2b [Source:UniProtKB/Swiss-Prot;Acc:Q9FPJ4]
Coordinates
chr5:+:19166859..19169093
Molecular Weight (calculated)
22314.4 Da
IEP (calculated)
5.043
GRAVY (calculated)
-0.290
Length
202 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPEYDYLFK LLLIGDSGVG KSCLLLRFAD DSYLDSYIST IGVDFKIRTV EQDGKTIKLQ IWDTAGQERF RTITSSYYRG AHGIIVTYDV TDLESFNNVK
101: QWLNEIDRYA SENVNKLLVG NKNDLTSQKV VSTETAKAFA DELGIPFLET SAKNATNVEE AFMAMTAAIK TRMASQPAGG AKPPTVQIRG QPVNQQSGCC
201: SS
101: QWLNEIDRYA SENVNKLLVG NKNDLTSQKV VSTETAKAFA DELGIPFLET SAKNATNVEE AFMAMTAAIK TRMASQPAGG AKPPTVQIRG QPVNQQSGCC
201: SS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.