Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH01059 | Soybean | endoplasmic reticulum | 93.6 | 94.06 |
| KRH40178 | Soybean | endoplasmic reticulum | 93.6 | 94.06 |
| KRH66494 | Soybean | endoplasmic reticulum | 91.13 | 91.13 |
| KRH57496 | Soybean | endoplasmic reticulum | 89.66 | 90.1 |
| Os01t0179700-01 | Rice | plasma membrane | 89.66 | 89.66 |
| Solyc05g052070.2.1 | Tomato | unclear | 89.66 | 89.66 |
| Solyc08g078070.2.1 | Tomato | nucleus | 89.66 | 89.66 |
| Os02t0653800-01 | Rice | plasma membrane | 89.66 | 89.66 |
| GSMUA_Achr2P18340_001 | Banana | plasma membrane | 89.16 | 89.6 |
| KRH04201 | Soybean | cytosol, extracellular | 89.16 | 89.6 |
| VIT_00s1372g00020.t01 | Wine grape | cytosol | 87.19 | 89.39 |
| TraesCS3A01G056600.1 | Wheat | cytosol | 89.16 | 89.16 |
| EES07529 | Sorghum | cytosol | 89.16 | 89.16 |
| TraesCS3B01G070300.2 | Wheat | cytosol | 89.16 | 89.16 |
| TraesCS3D01G056600.1 | Wheat | plastid | 89.16 | 89.16 |
| PGSC0003DMT400067463 | Potato | cytosol | 89.16 | 89.16 |
| PGSC0003DMT400041326 | Potato | cytosol | 88.67 | 88.67 |
| TraesCS3D01G056500.1 | Wheat | golgi | 88.67 | 88.67 |
| PGSC0003DMT400034028 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 88.18 | 88.18 |
| VIT_16s0013g00520.t01 | Wine grape | extracellular | 88.18 | 88.18 |
| Solyc05g053940.2.1 | Tomato | nucleus, plastid, unclear | 88.18 | 88.18 |
| GSMUA_Achr8P15030_001 | Banana | cytosol | 87.68 | 87.68 |
| TraesCS3A01G056500.1 | Wheat | cytosol | 87.68 | 87.68 |
| GSMUA_Achr11P... | Banana | cytosol | 87.19 | 87.19 |
| HORVU3Hr1G010800.8 | Barley | cytosol | 68.47 | 85.28 |
| AT5G47200.1 | Thale cress | cytosol | 84.24 | 84.65 |
| AT4G17530.1 | Thale cress | cytosol | 83.74 | 84.16 |
| Solyc01g090170.2.1 | Tomato | unclear | 83.74 | 83.74 |
| CDY38055 | Canola | cytosol | 97.54 | 83.54 |
| TraesCS3A01G056800.1 | Wheat | cytosol | 76.35 | 82.01 |
| KRH48822 | Soybean | cytosol, endoplasmic reticulum | 63.55 | 81.65 |
| GSMUA_Achr1P04400_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 87.68 | 78.41 |
| AT3G11730.1 | Thale cress | cytosol | 72.41 | 71.71 |
| TraesCS3A01G056900.1 | Wheat | mitochondrion | 57.14 | 69.46 |
| Zm00001d051336_P001 | Maize | plastid | 86.7 | 64.71 |
| HORVU3Hr1G010780.1 | Barley | plasma membrane | 88.67 | 64.52 |
| GSMUA_Achr7P06570_001 | Banana | cytosol | 85.22 | 62.91 |
| VIT_15s0021g01410.t01 | Wine grape | cytosol | 61.58 | 60.98 |
| AT3G46060.1 | Thale cress | cytosol | 63.05 | 59.26 |
| TraesCS3A01G056700.1 | Wheat | cytosol | 74.38 | 59.22 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, plastid | 87.68 | 59.14 |
| AT5G59840.1 | Thale cress | cytosol | 62.07 | 58.33 |
| AT5G03520.1 | Thale cress | cytosol | 62.07 | 58.33 |
| AT3G53610.3 | Thale cress | cytosol | 60.59 | 56.94 |
| AT3G09900.1 | Thale cress | cytosol | 60.59 | 56.42 |
| AT4G17160.1 | Thale cress | cytosol | 46.31 | 45.85 |
| AT4G35860.1 | Thale cress | cytosol | 47.29 | 45.5 |
| AT4G17170.1 | Thale cress | cytosol | 46.8 | 45.02 |
| Zm00001d017456_P003 | Maize | cytosol | 87.19 | 44.14 |
Protein Annotations
| MapMan:22.8.1.4 | Gene3D:3.40.50.300 | EntrezGene:837023 | UniProt:A0A178WIV4 | ProteinID:AAC24370.1 | ProteinID:AEE27387.1 |
| ArrayExpress:AT1G02130 | EnsemblPlantsGene:AT1G02130 | RefSeq:AT1G02130 | TAIR:AT1G02130 | RefSeq:AT1G02130-TAIR-G | EnsemblPlants:AT1G02130.1 |
| TAIR:AT1G02130.1 | Symbol:ATRAB1B | EMBL:AY052333 | EMBL:AY061905 | Unigene:At.21490 | EMBL:D01027 |
| GO:GO:0000139 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 |
| GO:GO:0005783 | GO:GO:0005789 | GO:GO:0005794 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006888 |
| GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016192 | GO:GO:0016787 | GO:GO:0032588 |
| GO:GO:0046686 | RefSeq:NP_171715.1 | ProteinID:OAP18309.1 | InterPro:P-loop_NTPase | UniProt:P28188 | PFAM:PF00071 |
| PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF666 |
| SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 | SMART:SM00177 | SUPFAM:SSF52540 |
| InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI00000A2F1F | : | : |
Description
RABD2ARas-related protein RABD2a [Source:UniProtKB/Swiss-Prot;Acc:P28188]
Coordinates
chr1:-:399983..401919
Molecular Weight (calculated)
22649.7 Da
IEP (calculated)
4.770
GRAVY (calculated)
-0.374
Length
203 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPEYDYLFK LLLIGDSGVG KSCLLLRFSD DSYVESYIST IGVDFKIRTV EQDGKTIKLQ IWDTAGQERF RTITSSYYRG AHGIIIVYDV TDEESFNNVK
101: QWLSEIDRYA SDNVNKLLVG NKSDLTENRA IPYETAKAFA DEIGIPFMET SAKDATNVEQ AFMAMSASIK ERMASQPAGN NARPPTVQIR GQPVAQKNGC
201: CST
101: QWLSEIDRYA SDNVNKLLVG NKSDLTENRA IPYETAKAFA DEIGIPFMET SAKDATNVEQ AFMAMSASIK ERMASQPAGN NARPPTVQIR GQPVAQKNGC
201: CST
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.