Factsheet for VIT_15s0021g01410.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s1372g00020.t01	Wine grape	cytosol	62.44	64.65
PGSC0003DMT400034028	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	63.9	64.53
GSMUA_Achr8P15030_001	Banana	cytosol	63.9	64.53
Solyc05g053940.2.1	Tomato	nucleus, plastid, unclear	63.9	64.53
Os01t0179700-01	Rice	plasma membrane	62.44	63.05
Os02t0653800-01	Rice	plasma membrane	62.44	63.05
TraesCS3A01G056600.1	Wheat	cytosol	62.44	63.05
TraesCS3B01G070300.2	Wheat	cytosol	62.44	63.05
TraesCS3D01G056600.1	Wheat	plastid	62.44	63.05
GSMUA_Achr2P18340_001	Banana	plasma membrane	61.95	62.87
KRH01059	Soybean	endoplasmic reticulum	61.95	62.87
EES07529	Sorghum	cytosol	61.95	62.56
GSMUA_Achr11P...	Banana	cytosol	61.95	62.56
Solyc01g090170.2.1	Tomato	unclear	61.95	62.56
VIT_16s0013g00520.t01	Wine grape	extracellular	61.95	62.56
KRH66494	Soybean	endoplasmic reticulum	61.46	62.07
TraesCS3D01G056500.1	Wheat	golgi	61.46	62.07
AT1G02130.1	Thale cress	cytosol	60.98	61.58
KRH40178	Soybean	endoplasmic reticulum	60.49	61.39
TraesCS3A01G056500.1	Wheat	cytosol	60.0	60.59
Bra012658.1-P	Field mustard	cytosol	58.05	58.91
Bra017497.1-P	Field mustard	cytosol	58.05	58.91
Bra022113.1-P	Field mustard	cytosol	58.05	58.91
Bra024956.1-P	Field mustard	cytosol	58.05	58.91
TraesCS3A01G056800.1	Wheat	cytosol	53.17	57.67
HORVU3Hr1G010800.8	Barley	cytosol	45.85	57.67
VIT_12s0035g01150.t01	Wine grape	vacuole	55.61	56.44
GSMUA_Achr1P04400_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	62.44	56.39
KRH48822	Soybean	cytosol, endoplasmic reticulum	43.41	56.33
CDY38055	Canola	cytosol	60.49	52.32
TraesCS3A01G056900.1	Wheat	mitochondrion	39.02	47.9
Zm00001d051336_P001	Maize	plastid	62.44	47.06
VIT_00s0878g00030.t01	Wine grape	cytosol	23.41	47.06
GSMUA_Achr7P06570_001	Banana	cytosol	60.98	45.45
HORVU3Hr1G010780.1	Barley	plasma membrane	61.46	45.16
VIT_13s0019g00520.t01	Wine grape	extracellular	46.83	44.44
Bra040162.1-P	Field mustard	cytosol	59.02	44.16
VIT_06s0004g04200.t01	Wine grape	cytosol	46.34	43.98
VIT_08s0007g04750.t01	Wine grape	cytosol	46.34	43.98
TraesCS3A01G056700.1	Wheat	cytosol	54.63	43.92
GSMUA_Achr11P...	Banana	endoplasmic reticulum, plastid	62.93	42.86
VIT_08s0040g02490.t01	Wine grape	cytosol	44.88	42.59
VIT_14s0066g00180.t01	Wine grape	cytosol	40.98	40.19
VIT_12s0057g01470.t01	Wine grape	extracellular	40.49	39.34
VIT_00s1506g00010.t01	Wine grape	cytosol	25.85	35.57
Zm00001d017456_P003	Maize	cytosol	61.95	31.67
VIT_00s0455g00010.t01	Wine grape	cytosol	13.17	20.3

Protein Annotations

EntrezGene:100254766	wikigene:100254766	Gene3D:3.40.50.300	MapMan:35.1	ProteinID:CBI16674	ProteinID:CBI16674.3
UniProt:D7SLZ6	EMBL:FN594952	GO:GO:0000139	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0005789	GO:GO:0005794	GO:GO:0006810	GO:GO:0006888
GO:GO:0008150	GO:GO:0016020	GO:GO:0016787	EntrezGene:LOC100254766	wikigene:LOC100254766	InterPro:P-loop_NTPase
PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF666	SMART:SM00173
SMART:SM00174	SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase
TIGRFAMs:TIGR00231	UniParc:UPI0001BE0F46	ArrayExpress:VIT_15s0021g01410	EnsemblPlantsGene:VIT_15s0021g01410	EnsemblPlants:VIT_15s0021g01410.t01	unigene:Vvi.21267
RefSeq:XP_002272294	RefSeq:XP_002272294.1	:	:	:	:

Description

No Description!

Coordinates

chr15:+:11695555..11698845

Molecular Weight (calculated)

22716.2 Da

IEP (calculated)

8.691

GRAVY (calculated)

-0.271

Length

205 amino acids

Sequence
(BLAST)

001: MHFKTLRDHL FKILLVGDSG VGKSCLLLRY ADDTYSEAYI STIGVDFKIC SMERDGRNLK LQIWDTAGQE RFRALTCSYY RGAHGVMVVY DVTDQESFDN
101: VKMWVKEVYS TAGKNVNIFL LGNKSDLTAD RVVSYKTAKA LADEIGAPLM EISAKDGSNV QQAFIAMATA VKERVVKERA TDNGRDSGVK TRGKPISQSR
201: SCCGS

Best Arabidopsis Sequence Match ( AT1G02130.1 )
(BLAST)

001: MNPEYDYLFK LLLIGDSGVG KSCLLLRFSD DSYVESYIST IGVDFKIRTV EQDGKTIKLQ IWDTAGQERF RTITSSYYRG AHGIIIVYDV TDEESFNNVK
101: QWLSEIDRYA SDNVNKLLVG NKSDLTENRA IPYETAKAFA DEIGIPFMET SAKDATNVEQ AFMAMSASIK ERMASQPAGN NARPPTVQIR GQPVAQKNGC
201: CST

Arabidopsis Description

RABD2ARas-related protein RABD2a [Source:UniProtKB/Swiss-Prot;Acc:P28188]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.