Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- cytosol 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
golgi:
25769308
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G056500.1 | Wheat | cytosol | 98.52 | 98.52 |
| TraesCS3D01G056600.1 | Wheat | plastid | 96.55 | 96.55 |
| Os02t0653800-01 | Rice | plasma membrane | 93.1 | 93.1 |
| Os01t0179700-01 | Rice | plasma membrane | 93.1 | 93.1 |
| EES07529 | Sorghum | cytosol | 93.1 | 93.1 |
| KRH01059 | Soybean | endoplasmic reticulum | 92.12 | 92.57 |
| KRH57496 | Soybean | endoplasmic reticulum | 91.63 | 92.08 |
| KRH04201 | Soybean | cytosol, extracellular | 91.13 | 91.58 |
| VIT_00s1372g00020.t01 | Wine grape | cytosol | 89.16 | 91.41 |
| VIT_16s0013g00520.t01 | Wine grape | extracellular | 91.13 | 91.13 |
| GSMUA_Achr2P18340_001 | Banana | plasma membrane | 90.64 | 91.09 |
| KRH40178 | Soybean | endoplasmic reticulum | 90.64 | 91.09 |
| Solyc05g052070.2.1 | Tomato | unclear | 90.64 | 90.64 |
| Solyc08g078070.2.1 | Tomato | nucleus | 90.15 | 90.15 |
| PGSC0003DMT400067463 | Potato | cytosol | 89.66 | 89.66 |
| PGSC0003DMT400041326 | Potato | cytosol | 89.66 | 89.66 |
| GSMUA_Achr8P15030_001 | Banana | cytosol | 89.66 | 89.66 |
| AT1G02130.1 | Thale cress | cytosol | 88.67 | 88.67 |
| GSMUA_Achr11P... | Banana | cytosol | 88.18 | 88.18 |
| KRH66494 | Soybean | endoplasmic reticulum | 88.18 | 88.18 |
| Bra012658.1-P | Field mustard | cytosol | 86.21 | 86.63 |
| Bra017497.1-P | Field mustard | cytosol | 86.21 | 86.63 |
| Bra022113.1-P | Field mustard | cytosol | 86.21 | 86.63 |
| Bra024956.1-P | Field mustard | cytosol | 86.21 | 86.63 |
| PGSC0003DMT400034028 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 86.21 | 86.21 |
| Solyc05g053940.2.1 | Tomato | nucleus, plastid, unclear | 86.21 | 86.21 |
| Solyc01g090170.2.1 | Tomato | unclear | 82.27 | 82.27 |
| GSMUA_Achr1P04400_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 89.66 | 80.18 |
| TraesCS3D01G206600.1 | Wheat | cytosol | 85.71 | 78.73 |
| KRH48822 | Soybean | cytosol, endoplasmic reticulum | 60.1 | 77.22 |
| CDY38055 | Canola | cytosol | 90.15 | 77.22 |
| TraesCS1D01G013200.1 | Wheat | cytosol, extracellular | 72.91 | 72.55 |
| HORVU3Hr1G010780.1 | Barley | plasma membrane | 99.51 | 72.4 |
| TraesCS2D01G309200.2 | Wheat | cytosol | 71.43 | 68.08 |
| Zm00001d051336_P001 | Maize | plastid | 91.13 | 68.01 |
| TraesCS3A01G056700.1 | Wheat | cytosol | 82.76 | 65.88 |
| GSMUA_Achr7P06570_001 | Banana | cytosol | 88.67 | 65.45 |
| Bra040162.1-P | Field mustard | cytosol | 84.73 | 62.77 |
| VIT_15s0021g01410.t01 | Wine grape | cytosol | 62.07 | 61.46 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, plastid | 89.16 | 60.13 |
| TraesCS1D01G285200.1 | Wheat | cytosol | 59.61 | 56.54 |
| TraesCS5D01G489700.1 | Wheat | cytosol | 59.11 | 56.07 |
| TraesCS3D01G350000.3 | Wheat | cytosol | 61.08 | 52.1 |
| TraesCS6D01G188500.1 | Wheat | golgi | 48.28 | 46.67 |
| TraesCS2D01G331300.1 | Wheat | golgi, plastid | 47.78 | 46.19 |
| Zm00001d017456_P003 | Maize | cytosol | 91.13 | 46.13 |
| TraesCS5D01G264100.1 | Wheat | cytosol | 42.36 | 40.57 |
| TraesCS3D01G495900.1 | Wheat | cytosol | 34.98 | 39.66 |
Protein Annotations
| MapMan:22.8.1.4 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 |
| PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF666 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 |
| SMART:SM00176 | SMART:SM00177 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 |
| EnsemblPlantsGene:TraesCS3D01G056500 | EnsemblPlants:TraesCS3D01G056500.1 | TIGR:cd01869 | : | : | : |
Description
No Description!
Coordinates
chr3D:+:23666013..23669168
Molecular Weight (calculated)
22651.8 Da
IEP (calculated)
5.065
GRAVY (calculated)
-0.300
Length
203 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPEYDYLFK LLLIGDSGVG KSCLLLRFAD DSYLDSYIST IGVDFKIRTV EQDGKTIKLQ IWDTAGQERF RTITSSYYRG AHGIIIVYDV TDQDSFNNVK
101: QWLNEIDRYA SENVNKLLVG NKCDLADKRA VSYETAKAFA DEIGIPFMET SAKNALNVEQ AFMAMAASIK DRMASQPAAN NARPATVQIR GQPVEQKTSC
201: CSS
101: QWLNEIDRYA SENVNKLLVG NKCDLADKRA VSYETAKAFA DEIGIPFMET SAKNALNVEQ AFMAMAASIK DRMASQPAAN NARPATVQIR GQPVEQKTSC
201: CSS
001: MNPEYDYLFK LLLIGDSGVG KSCLLLRFSD DSYVESYIST IGVDFKIRTV EQDGKTIKLQ IWDTAGQERF RTITSSYYRG AHGIIIVYDV TDEESFNNVK
101: QWLSEIDRYA SDNVNKLLVG NKSDLTENRA IPYETAKAFA DEIGIPFMET SAKDATNVEQ AFMAMSASIK ERMASQPAGN NARPPTVQIR GQPVAQKNGC
201: CST
101: QWLSEIDRYA SDNVNKLLVG NKSDLTENRA IPYETAKAFA DEIGIPFMET SAKDATNVEQ AFMAMSASIK ERMASQPAGN NARPPTVQIR GQPVAQKNGC
201: CST
Arabidopsis Description
RABD2ARas-related protein RABD2a [Source:UniProtKB/Swiss-Prot;Acc:P28188]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.