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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G124100.1
TraesCS1B01G143000.1
TraesCS1D01G130300.1
TraesCS3A01G104300.1
TraesCS3A01G185700.1
TraesCS3B01G122600.1
TraesCS3B01G215300.1
TraesCS3D01G106500.1
TraesCS3D01G189700.1
TraesCS3D01G373900.1 peroxisome
TraesCS7A01G019000.1
TraesCS7D01G016100.1
TraesCSU01G065800.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G46060.1 TraesCS3D01G373900.1 AT1G29260.1 23297417
AT3G46060.1 TraesCS3A01G185700.1 AT3G06540.1 21798944
AT3G46060.1 TraesCS3B01G215300.1 AT3G06540.1 21798944
AT3G46060.1 TraesCS3D01G189700.1 AT3G06540.1 21798944
AT3G46060.1 TraesCS1A01G124100.1 AT3G13720.1 21798944
AT3G46060.1 TraesCS1B01G143000.1 AT3G13720.1 21798944
AT3G46060.1 TraesCS1D01G130300.1 AT3G13720.1 21798944
AT3G46060.1 TraesCS3A01G104300.1 AT3G13720.1 21798944
AT3G46060.1 TraesCS3B01G122600.1 AT3G13720.1 21798944
AT3G46060.1 TraesCS3D01G106500.1 AT3G13720.1 21798944
AT3G46060.1 TraesCS7A01G019000.1 AT4G25660.1 21798944
AT3G46060.1 TraesCS7D01G016100.1 AT4G25660.1 21798944
AT3G46060.1 TraesCSU01G065800.1 AT4G25660.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G388900.1 Wheat cytosol 89.92 99.07
TraesCS3A01G356000.3 Wheat plastid 89.5 98.61
CDY72056 Canola cytosol 50.84 96.8
TraesCS1D01G285200.1 Wheat cytosol 84.45 93.93
Solyc06g005350.2.1 Tomato cytosol 56.72 93.75
GSMUA_Achr10P... Banana cytosol 84.03 92.59
GSMUA_Achr9P03220_001 Banana cytosol 84.03 92.59
GSMUA_Achr11P... Banana cytosol 83.61 92.13
GSMUA_Achr6P34270_001 Banana cytosol 83.19 91.67
Solyc11g073050.1.1 Tomato endoplasmic reticulum 82.77 91.2
GSMUA_AchrUn_... Banana cytosol 82.35 90.74
PGSC0003DMT400040138 Potato cytosol 82.35 90.74
KRH29838 Soybean endoplasmic reticulum 81.51 90.65
Bra019475.1-P Field mustard cytosol 81.93 90.28
KRH24835 Soybean cytosol 81.09 90.19
GSMUA_Achr8P02620_001 Banana cytosol 81.51 89.81
VIT_13s0019g00520.t01 Wine grape extracellular 81.51 89.81
CDY30926 Canola cytosol 81.51 89.81
KRH01606 Soybean endoplasmic reticulum 81.09 89.35
VIT_08s0040g02490.t01 Wine grape cytosol 81.09 89.35
KRH70501 Soybean endoplasmic reticulum 81.09 89.35
CDY71506 Canola cytosol 80.67 88.89
AT3G46060.1 Thale cress cytosol 80.67 88.89
KRH36193 Soybean endoplasmic reticulum, extracellular 80.67 88.89
PGSC0003DMT400022823 Potato cytosol 80.67 88.89
AT5G59840.1 Thale cress cytosol 80.67 88.89
VIT_06s0004g04200.t01 Wine grape cytosol 80.67 88.89
Solyc09g010370.2.1 Tomato extracellular, plastid 80.67 88.89
CDX68365 Canola cytosol 80.67 88.89
CDX86045 Canola cytosol 80.67 88.89
CDX77855 Canola cytosol 80.67 88.89
PGSC0003DMT400071317 Potato cytosol 80.25 88.43
Bra002527.1-P Field mustard cytosol 80.25 88.43
KRG90563 Soybean cytosol 80.25 88.43
CDY31592 Canola cytosol 80.25 88.43
PGSC0003DMT400049296 Potato cytosol 80.25 88.43
KRH10292 Soybean cytosol 79.83 88.37
KRH23030 Soybean endoplasmic reticulum 79.83 88.37
GSMUA_Achr10P... Banana cytosol 79.83 87.96
Solyc04g011360.2.1 Tomato plastid 79.83 87.96
PGSC0003DMT400008917 Potato cytosol 79.83 87.96
TraesCS5D01G489700.1 Wheat cytosol 78.99 87.85
Bra033830.1-P Field mustard cytosol 70.59 87.05
Solyc10g086350.1.1 Tomato cytosol, nucleus 78.99 87.04
AT3G53610.3 Thale cress cytosol 78.99 87.04
Bra006690.1-P Field mustard cytosol 78.99 87.04
CDX88725 Canola cytosol 78.57 86.57
CDX88726 Canola cytosol 78.57 86.57
CDX80224 Canola cytosol 77.31 86.39
Bra020282.1-P Field mustard cytosol 76.47 84.26
CDY09249 Canola cytosol 76.05 83.8
CDY34032 Canola cytosol 47.06 76.19
CDY70243 Canola cytosol 46.64 73.03
CDY07577 Canola cytosol 79.41 70.79
CDY52746 Canola cytosol 78.99 69.89
Bra003149.1-P Field mustard cytosol 78.99 69.89
HORVU3Hr1G086830.7 Barley cytosol 77.73 69.81
CDX94925 Canola cytosol 47.48 68.9
CDX99131 Canola cytosol 81.09 62.66
TraesCS3D01G056500.1 Wheat golgi 52.1 61.08
TraesCS3D01G056600.1 Wheat plastid 51.26 60.1
TraesCS1D01G013200.1 Wheat cytosol, extracellular 46.22 53.92
TraesCS3D01G206600.1 Wheat cytosol 50.0 53.85
TraesCS2D01G309200.2 Wheat cytosol 46.22 51.64
Bra038265.1-P Field mustard cytosol 80.67 51.06
TraesCS2D01G331300.1 Wheat golgi, plastid 37.82 42.86
TraesCS6D01G188500.1 Wheat golgi 37.82 42.86
TraesCS3D01G495900.1 Wheat cytosol 27.31 36.31
TraesCS5D01G264100.1 Wheat cytosol 30.67 34.43
Protein Annotations
MapMan:22.8.1.5Gene3D:3.40.50.300GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0003924
GO:GO:0005488GO:GO:0005525GO:GO:0016787InterPro:P-loop_NTPasePFAM:PF00071PRINTS:PR00449
PFscan:PS51419PANTHER:PTHR24073PANTHER:PTHR24073:SF646SMART:SM00173SMART:SM00174SMART:SM00175
SMART:SM00176SUPFAM:SSF52540InterPro:Small_GTP-bd_domInterPro:Small_GTPaseTIGRFAMs:TIGR00231EnsemblPlantsGene:TraesCS3D01G350000
EnsemblPlants:TraesCS3D01G350000.3TIGR:cd01867SEG:seg:::
Description
No Description!
Coordinates
chr3D:+:461307938..461311894
Molecular Weight (calculated)
26422.3 Da
IEP (calculated)
8.461
GRAVY (calculated)
-0.415
Length
238 amino acids
Sequence
(BLAST)
001: MAAPPARARA DYDYLIKLLL IGDSGDSPCP PARSLSRPAA GFCTRVRNGV GKSCLLLRFS DGSFTTSFIT TIGIDFKIRT IELDGKRIKL QIWDTAGQER
101: FRTITTAYYR GAMGILLVYD VTDESSFNNI RNWIRNIEQH ASDNVNKILI GNKADMDESK RAVSTAKGQA LADEYGIQFF ETSAKTNLNV EQVFFSIARD
201: IKQRLAETDS KPEDRTIKIN KTEGSENPES QKSACCGS
Best Arabidopsis Sequence Match ( AT3G46060.1 )
(BLAST)
001: MAAPPARARA DYDYLIKLLL IGDSGVGKSC LLLRFSDGSF TTSFITTIGI DFKIRTIELD GKRIKLQIWD TAGQERFRTI TTAYYRGAMG ILLVYDVTDE
101: SSFNNIRNWI RNIEQHASDN VNKILVGNKA DMDESKRAVP TAKGQALADE YGIKFFETSA KTNLNVEEVF FSIGRDIKQR LSDTDSRAEP ATIKISQTDQ
201: AAGAGQATQK SACCGT
Arabidopsis Description
RABE1CRABE1c [Source:UniProtKB/TrEMBL;Acc:A0A178VAR9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.